RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 STRIP2Q9ULQ0 834 aa25.36■■□□□ 1.65
APOE-202ENST00000425718 ZFP37Q9Y6Q3 630 aaPredicted RBP25.36■■□□□ 1.65
APOE-202ENST00000425718 NRDCO43847 1150 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 ZBED1O96006 694 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 SKILP12757 684 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 MYL4P12829 197 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 GABRR2P28476 465 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 SSTR3P32745 418 aaPredicted RBP25.35■■□□□ 1.65
APOE-202ENST00000425718 CENPCQ03188 943 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 ADIGQ0VDE8 80 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 CBX2Q14781 532 aaPredicted RBP25.35■■□□□ 1.65
APOE-202ENST00000425718 PM20D1Q6GTS8 502 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 ZNF571Q7Z3V5 609 aaPredicted RBP25.35■■□□□ 1.65
APOE-202ENST00000425718 TADA2BQ86TJ2 420 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 TMC8Q8IU68 726 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 SPC24Q8NBT2 197 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 APOL5Q9BWW9 433 aa25.35■■□□□ 1.65
APOE-202ENST00000425718 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.35■■□□□ 1.657e-6■■■■□ 21.3
APOE-202ENST00000425718 MRPS23Q9Y3D9 190 aaKnown RBP25.35■■□□□ 1.65
APOE-202ENST00000425718 USP15Q9Y4E8 981 aaPredicted RBP25.35■■□□□ 1.65
APOE-202ENST00000425718 REV3LO60673 3130 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 DOCK8Q8NF50 2099 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 MBTPS2O43462 519 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 CALB1P05937 261 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 UNGP13051 313 aaPredicted RBP25.34■■□□□ 1.65
APOE-202ENST00000425718 FSHRP23945 695 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 RGS7P49802 495 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 IFRD2Q12894 506 aaPredicted RBP25.34■■□□□ 1.65
APOE-202ENST00000425718 TAF10Q12962 218 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 MTMR3Q13615 1198 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 NAA35Q5VZE5 725 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 SCAMP5Q8TAC9 235 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 C18orf8Q96DM3 657 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 VCPIP1Q96JH7 1222 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 CCDC42Q96M95 316 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.34■■□□□ 1.65
APOE-202ENST00000425718 LRRC3Q9BY71 257 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 WDR35Q9P2L0 1181 aa25.34■■□□□ 1.65
APOE-202ENST00000425718 TULP2O00295 520 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 CFHP08603 1231 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 LCP1P13796 627 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 SCNN1AP37088 669 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 GABRB2P47870 512 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 CLUL1Q15846 466 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 SNX30Q5VWJ9 437 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 WDR59Q6PJI9 974 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 TOGARAM2Q6ZUX3 1019 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 PHF13Q86YI8 300 aaPredicted RBP25.33■■□□□ 1.65
APOE-202ENST00000425718 WDTC1Q8N5D0 677 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 TRIM11Q96F44 468 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 ATXN3LQ9H3M9 355 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 HCFC1R1Q9NWW0 138 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 ARHGAP20Q9P2F6 1191 aa25.33■■□□□ 1.65
APOE-202ENST00000425718 F11P03951 625 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 GLI1P08151 1106 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 RALAP11233 206 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 TUBP50607 506 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 USP46P62068 366 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 C1QBPQ07021 282 aaKnown RBP25.32■■□□□ 1.64
APOE-202ENST00000425718 PRSS36Q5K4E3 855 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 ACAD10Q6JQN1 1059 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 GPRIN1Q7Z2K8 1008 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 TMTC1Q8IUR5 882 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 GPIHBP1Q8IV16 184 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 CCDC170Q8IYT3 715 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 HS6ST3Q8IZP7 471 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 ZNF276Q8N554 614 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 CPXM1Q96SM3 734 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 ULBP1Q9BZM6 244 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 IL21Q9HBE4 155 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 ZNF334Q9HCZ1 680 aaPredicted RBP25.32■■□□□ 1.64
APOE-202ENST00000425718 ASNSD1Q9NWL6 643 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 GDE1Q9NZC3 331 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 USTQ9Y2C2 406 aa25.32■■□□□ 1.64
APOE-202ENST00000425718 NUP210Q8TEM1 1887 aaPredicted RBP25.32■■□□□ 1.64
APOE-202ENST00000425718 E5RJQ4 531 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 AKR1B10O60218 316 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 RTN2O75298 545 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 MRPS5P82675 430 aaKnown RBP25.31■■□□□ 1.64
APOE-202ENST00000425718 SMAD2Q15796 467 aaKnown RBP25.31■■□□□ 1.64
APOE-202ENST00000425718 EFHC1Q5JVL4 640 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 OTOP3Q7RTS5 596 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 CPA5Q8WXQ8 436 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 ACSF2Q96CM8 615 aaPredicted RBP25.31■■□□□ 1.64
APOE-202ENST00000425718 CLIC5Q9NZA1 410 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 ADAMTS1Q9UHI8 967 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 CYTH4Q9UIA0 394 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 NR2E1Q9Y466 385 aa25.31■■□□□ 1.64
APOE-202ENST00000425718 USP17L7P0C7H9 530 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 ZDHHC11BP0C7U3 371 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 FECHP22830 423 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 MMP8P22894 467 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 CYLC1P35663 651 aaPredicted RBP25.3■■□□□ 1.64
APOE-202ENST00000425718 EIF4A3P38919 411 aaKnown RBP25.3■■□□□ 1.64
APOE-202ENST00000425718 GSCP56915 257 aaPredicted RBP25.3■■□□□ 1.64
APOE-202ENST00000425718 DAOAP59103 153 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 ZNF268Q14587 947 aaPredicted RBP25.3■■□□□ 1.64
APOE-202ENST00000425718 SLC18A3Q16572 532 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 PTPN20Q4JDL3 420 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 PTCRAQ6ISU1 281 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms