RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MTTPP55157 894 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 CDKL1Q00532 357 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 ZNF543Q08ER8 600 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 NFX1Q12986 1120 aaKnown RBP11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 OASLQ15646 514 aaKnown RBP11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 TMCO4Q5TGY1 634 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 OGFOD2Q6N063 350 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 C16orf46Q6P387 395 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 OLFML1Q6UWY5 402 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 SLC7A5P1Q8MH63 180 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 FNDC8Q8TC99 324 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 MZB1Q8WU39 189 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 LENG9Q96B70 501 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 CCDC106Q9BWC9 280 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 UVRAGQ9P2Y5 699 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 TELO2Q9Y4R8 837 aa11.75□□□□□ -0.53
SEC61A1-202ENST00000424880 TMEM247A6NEH6 219 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 TRIM49D1C9J1S8 452 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 COPEO14579 308 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 ATP2A1O14983 1001 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 LSM1O15116 133 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 AP1G1O43747 822 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 DGKIO75912 1065 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 ADRB2P07550 413 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 EFHC2Q5JST6 749 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 RNASEH2BQ5TBB1 312 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 SPOPLQ6IQ16 392 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 TMEM53Q6P2H8 277 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 C1orf186Q6ZWK4 172 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 FASTKD5Q7L8L6 764 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 SEMA6AQ9H2E6 1030 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 IFT122Q9HBG6 1241 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 GPRC5CQ9NQ84 441 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 FAIMQ9NVQ4 179 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 IVNS1ABPQ9Y6Y0 642 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 CROCCQ5TZA2 2017 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 ATRNL1Q5VV63 1379 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 F8VP50 259 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 ITM2AO43736 263 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 TMEM63AO94886 807 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 CDH2P19022 906 aaPredicted RBP11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 FGFR3P22607 806 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 DSG3P32926 999 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 SLC1A1P43005 524 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 PSMD6Q15008 389 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 CRY2Q49AN0 593 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 TDRPQ86YL5 185 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 E2F7Q96AV8 911 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 RBM38Q9H0Z9 239 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 CDH22Q9UJ99 828 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 EFR3BQ9Y2G0 817 aa11.74□□□□□ -0.53
SEC61A1-202ENST00000424880 TLR3O15455 904 aaKnown RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 CFLARO15519 480 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 APBA3O96018 575 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 KRT1P04264 644 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 INHBAP08476 426 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 F7P08709 466 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 NFKBIAP25963 317 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 ELK3P41970 407 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 HALP42357 657 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 RPL26P61254 145 aaKnown RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 FAXCQ5TGI0 409 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 SYDE1Q6ZW31 735 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 SLFN12Q8IYM2 578 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 MCOLN2Q8IZK6 566 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 BBOF1Q8ND07 529 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 FAM156AQ8NDB6 213 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 ADAM32Q8TC27 787 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 OLFML3Q9NRN5 406 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 FZD1Q9UP38 647 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 CXorf49A8MYA2 514 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 NDUFB5O43674 189 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 FKBP6O75344 327 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 KCNA4P22459 653 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 MAN1A1P33908 653 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 PSMC5P62195 406 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 KRT81Q14533 505 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 MROH9Q5TGP6 573 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 FRMD7Q6ZUT3 714 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 ZNF410Q86VK4 478 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 PHTF2Q8N3S3 785 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 TRIML2Q8N7C3 387 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 PPP1R14CQ8TAE6 165 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 DDX1Q92499 740 aaKnown RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 HSPH1Q92598 858 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 USP13Q92995 863 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 STRIP2Q9ULQ0 834 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 GNEQ9Y223 722 aaKnown RBP11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 MAD1L1Q9Y6D9 718 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 C10orf71Q711Q0 1435 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 TCRBV9S1A1TA0A576 114 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 KANSL1LA0AUZ9 987 aa11.73□□□□□ -0.53
SEC61A1-202ENST00000424880 KBTBD13C9JR72 458 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms