RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 SNX30Q5VWJ9 437 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 BRAPQ7Z569 592 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 CHCHD4Q8N4Q1 142 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 GLIS3Q8NEA6 775 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 HMGB4Q8WW32 186 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 ADAMTS14Q8WXS8 1223 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 PCED1BQ96HM7 432 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 HPDLQ96IR7 371 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 ANKRD36BP1Q96IX9 119 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 LAMA5O15230 3695 aa16.59■□□□□ 0.25
RPUSD3-204ENST00000424438 TCRBV21S2A2A0A5A6 115 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 ANTXRLA6NF34 631 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 H3BQV1 296 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 ARHGAP33O14559 1287 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 ATP2C2O75185 946 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 GJB3O75712 270 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 KRT19P08727 400 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 LMO2P25791 158 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 SLC6A11P48066 632 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 TUBP50607 506 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 SCAPQ12770 1279 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 TDRD10Q5VZ19 366 aaKnown RBP16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 C12orf40Q86WS4 652 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 MINDY1Q8N5J2 469 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 SAAL1Q96ER3 474 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 ELOVL4Q9GZR5 314 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 CCDC86Q9H6F5 360 aaKnown RBP16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 PDE11AQ9HCR9 933 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 CD248Q9HCU0 757 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 CFAP97Q9P2B7 532 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 NFE2L3Q9Y4A8 694 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 LOC400499M0QZD8 3231 aa16.58■□□□□ 0.24
RPUSD3-204ENST00000424438 F8VP50 259 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 HCRTO43612 131 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 CFIP05156 583 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 GABRG2P18507 467 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 RPL6Q02878 288 aaKnown RBP16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 GRIN1Q05586 938 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 ZNF33AQ06730 810 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 TAF10Q12962 218 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 DUOXA2Q1HG44 320 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 LY6G5CQ5SRR4 150 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 EMC10Q5UCC4 262 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 ARMCX6Q7L4S7 300 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 TTC30AQ86WT1 665 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 SFTPA1Q8IWL2 248 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 GPD1LQ8N335 351 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 FRMD1Q8N878 549 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 TERB1Q8NA31 727 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 ZSWIM2Q8NEG5 633 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 ZFRQ96KR1 1074 aaKnown RBP16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 ZDHHC5Q9C0B5 715 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 FAM124BQ9H5Z6 455 aaPredicted RBP16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 CCDC39Q9UFE4 941 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 SUSD2Q9UGT4 822 aa16.57■□□□□ 0.24
RPUSD3-204ENST00000424438 RTN3O95197 1032 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 GCNT3O95395 438 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 STAU1O95793 577 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 TNNC2P02585 160 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 NTSR1P30989 418 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 PSMC1P62191 440 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 BTBD8Q5XKL5 378 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 DYMQ7RTS9 669 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 GLRX5Q86SX6 157 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 WDR49Q8IV35 697 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 SYCP3Q8IZU3 236 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 ZNF513Q8N8E2 541 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 HNRNPLLQ8WVV9 542 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 ZNF419Q96HQ0 510 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 LRIG1Q96JA1 1093 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 CBWD1Q9BRT8 395 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 KIAA1586Q9HCI6 787 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 COMMD8Q9NX08 183 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 IL37Q9NZH6 218 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 DEC1Q9P2X7 70 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 MORC2Q9Y6X9 1032 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 PLXNB3Q9ULL4 1909 aa16.56■□□□□ 0.24
RPUSD3-204ENST00000424438 ATXN2Q99700 1313 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 IGHV1OR15-9A0A0B4J2B8 117 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 FAM92AA1XBS5 289 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 TBC1D3BA6NDS4 549 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 ZNF233A6NK53 670 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 TULP3O75386 442 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 MBL2P11226 248 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 GJB2P29033 226 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 CYP27A1Q02318 531 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 C19orf57Q0VDD7 668 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 SV2BQ7L1I2 683 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 METTL3Q86U44 580 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 PGBD3Q8N328 593 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 FOXJ1Q92949 421 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 SPHK2Q9NRA0 654 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 SMPD4Q9NXE4 827 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 CALCOCO1Q9P1Z2 691 aa16.55■□□□□ 0.24
RPUSD3-204ENST00000424438 DKK4Q9UBT3 224 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms