RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 PHF2O75151 1096 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 FRAT2O75474 233 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 NCR1O76036 304 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 NDUFA10O95299 355 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 HSPA8P11142 646 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 CDK4P11802 303 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 SCG2P13521 617 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 MUTP22033 750 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 PBLDP30039 288 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 GNL1P36915 607 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 FLT3LGP49771 235 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 SEC24CP53992 1094 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 RNASE9P60153 205 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 GBE1Q04446 702 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 IKQ13123 557 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 SETMARQ53H47 684 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 VPS53Q5VIR6 699 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 NXNQ6DKJ4 435 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 TMCO3Q6UWJ1 677 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 KRT26Q7Z3Y9 468 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 RD3Q7Z3Z2 195 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 TBC1D1Q86TI0 1168 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 DDX42Q86XP3 938 aaKnown RBP eCLIP3.12□□□□□ -1.91
PMS1-209ENST00000424059 SLC41A1Q8IVJ1 513 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 TBC1D21Q8IYX1 336 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 TMCO5AQ8N6Q1 288 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 B4GALNT2Q8NHY0 566 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 OTUD7AQ8TE49 926 aaPredicted RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 TFAP2CQ92754 450 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 SDCCAG3Q96C92 435 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 NRBF2Q96F24 287 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 CCDC114Q96M63 670 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 PPP1R9BQ96SB3 815 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 STRBPQ96SI9 672 aaKnown RBP3.12□□□□□ -1.91
PMS1-209ENST00000424059 PANK2Q9BZ23 570 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 B3GNT4Q9C0J1 378 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 RABEP2Q9H5N1 569 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 DNAJC18Q9H819 358 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 SPON1Q9HCB6 807 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 GPRC5DQ9NZD1 345 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ZIM2Q9NZV7 527 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 POGKQ9P215 609 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ANKFY1Q9P2R3 1169 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 PRSS50Q9UI38 385 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ITGB1BP2Q9UKP3 347 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 TMPRSS11EQ9UL52 423 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 CARD8Q9Y2G2 431 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 CDY2AQ9Y6F7 541 aa3.12□□□□□ -1.91
PMS1-209ENST00000424059 ATAD2BQ9ULI0 1458 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 PLEKHG2Q9H7P9 1386 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 NISCHQ9Y2I1 1504 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 SYNJ2BP-COX16A0A087WUM0 186 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 RNF113AO15541 343 aaKnown RBP3.11□□□□□ -1.91
PMS1-209ENST00000424059 AKAP10O43572 662 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 ZBTB14O43829 449 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 CEP104O60308 925 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 LPXNO60711 386 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 PRAMEF4O60810 478 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 GFPT2O94808 682 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 SNX4O95219 450 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 ESRRBO95718 433 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 BAG2O95816 211 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 P4HA1P13674 534 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 PSMA4P25789 261 aaKnown RBP3.11□□□□□ -1.91
PMS1-209ENST00000424059 ELF1P32519 619 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 HOXD12P35452 270 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 SLC16A2P36021 539 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 RANBP1P43487 201 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 TM4SF4P48230 202 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 MCM2P49736 904 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 B2MP61769 119 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 PPP1R7Q15435 360 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 IMMTQ16891 758 aaKnown RBP3.11□□□□□ -1.91
PMS1-209ENST00000424059 CCDC14Q49A88 953 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 GPATCH4Q5T3I0 446 aaKnown RBP3.11□□□□□ -1.91
PMS1-209ENST00000424059 FCRLBQ6BAA4 426 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 NAA16Q6N069 864 aaPredicted RBP3.11□□□□□ -1.91
PMS1-209ENST00000424059 MICALCLQ6ZW33 695 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 CENPQQ7L2Z9 268 aaPredicted RBP3.11□□□□□ -1.91
PMS1-209ENST00000424059 ATG9AQ7Z3C6 839 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 C10orf67Q8IYJ2 551 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 NXPE1Q8N323 547 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 SPC24Q8NBT2 197 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 TRPC4APQ8TEL6 797 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 FATE1Q969F0 183 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 CAVIN3Q969G5 261 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 FUBP1Q96AE4 644 aaKnown RBP3.11□□□□□ -1.91
PMS1-209ENST00000424059 PSKH2Q96QS6 385 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 RTFDC1Q9BY42 306 aaPredicted RBP3.11□□□□□ -1.91
PMS1-209ENST00000424059 GLT8D2Q9H1C3 349 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 SMARCAD1Q9H4L7 1026 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 RASSF1Q9NS23 344 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 HOMER3Q9NSC5 361 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 RGL1Q9NZL6 768 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 PDP2Q9P2J9 529 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 TUBGCP4Q9UGJ1 667 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 DUSP12Q9UNI6 340 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 ATP11BQ9Y2G3 1177 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 SLC4A4Q9Y6R1 1079 aa3.11□□□□□ -1.91
PMS1-209ENST00000424059 FAM83GA6ND36 823 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms