RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 TSGA10IPQ3SY00 556 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 EPHX4Q8IUS5 362 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 LENG1Q96BZ8 264 aaPredicted RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 TNIP3Q96KP6 325 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 BTBD3Q9Y2F9 522 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ADAM17P78536 824 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 CCZ1BP86790 482 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 CCZ1P86791 482 aaPredicted RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 TTC39BQ5VTQ0 682 aaPredicted RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 IRAK1BP1Q5VVH5 260 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 E2F7Q96AV8 911 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 RMND5BQ96G75 393 aaPredicted RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 C1orf50Q9BV19 199 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 UVRAGQ9P2Y5 699 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 SPATA31A3Q5VYP0 1347 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ZNF806P0C7X5 589 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 PSMA3P25788 255 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ALDH7A1P49419 539 aaKnown RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 DPYDQ12882 1025 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 CPA5Q8WXQ8 436 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 CCDC115Q96NT0 180 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 PHF20Q9BVI0 1012 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 PIF1Q9H611 641 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 JMJD4Q9H9V9 463 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 SCUBE2Q9NQ36 999 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 PLCL2Q9UPR0 1127 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 SETD1BQ9UPS6 1966 aaKnown RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 ACADMP11310 421 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ZNF200P98182 395 aaPredicted RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 PDIA5Q14554 519 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 KIAA0408Q6ZU52 694 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 OTOAQ7RTW8 1153 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 AKAP14Q86UN6 197 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 POC5Q8NA72 575 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ASAP3Q8TDY4 903 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 SH2D3AQ9BRG2 576 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ACTR2P61160 394 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ANGEL2Q5VTE6 544 aaKnown RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 KCNV1Q6PIU1 500 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 CLEC17AQ6ZS10 378 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ZBTB49Q6ZSB9 765 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 BRINP3Q76B58 766 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 LRRC6Q86X45 466 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 C9orf72Q96LT7 481 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 TRIM10Q9UDY6 481 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 PMF1-BGLAPU3KQ54 211 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 CCDC189A1A4V9 331 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 PHF2O75151 1096 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 TNFAIP8O95379 198 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 GH1P01241 217 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 PRKCBP05771 671 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 SRGNP10124 158 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 CDH3P22223 829 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 HSD17B4P51659 736 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 EIF2S3LQ2VIR3 472 aaKnown RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 C2CD6Q53TS8 623 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 ADSSL1Q8N142 457 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 C10orf53Q8N6V4 93 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 YME1L1Q96TA2 773 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 NUDT12Q9BQG2 462 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 APEX2Q9UBZ4 518 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 IGFBP4P22692 258 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 TWF1Q12792 350 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 USP10Q14694 798 aaKnown RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 KDM7AQ6ZMT4 941 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 ATG9AQ7Z3C6 839 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 RCOR2Q8IZ40 523 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 RNASE11Q8TAA1 199 aaKnown RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 MYCBPAPQ8TBZ2 947 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 USP13Q92995 863 aaPredicted RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 CNPY3Q9BT09 278 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 THUMPD3Q9BV44 507 aaKnown RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 DGCR6LQ9BY27 220 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 LAMC1P11047 1609 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 RFX3P48380 749 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 STAT5BP51692 787 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 GALCP54803 685 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 KYAT1Q16773 422 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 RBM15Q96T37 977 aaKnown RBP eCLIP11.47□□□□□ -0.57
TNC-203ENST00000423613 PCDH12Q9NPG4 1184 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 AGPAT5Q9NUQ2 364 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 EFCAB10A6NFE3 127 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 SNTNA6NMZ2 147 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 MEI4A8MW99 385 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 GSSP48637 474 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 ULK3Q6PHR2 472 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 MTHFD1LQ6UB35 978 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 GLB1LQ6UWU2 654 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 BNC2Q6ZN30 1099 aaPredicted RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 PROSER1Q86XN7 944 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 ZKSCAN4Q969J2 545 aaPredicted RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 RBBP8Q99708 897 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 STK33Q9BYT3 514 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 ERAP1Q9NZ08 941 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 CTNNAL1Q9UBT7 734 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 MAP3K4Q9Y6R4 1608 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms