RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 Q6ZNX1 250 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 GPR142Q7Z601 462 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 ETFBKMTQ8IXQ9 262 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 CERS5Q8N5B7 392 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 OR6S1Q8NH40 331 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 RUFY2Q8WXA3 655 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 EDC3Q96F86 508 aaKnown RBP4.32□□□□□ -1.72
PTPN22-202ENST00000420377 PHACTR3Q96KR7 559 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 TSNARE1Q96NA8 513 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 CTRCQ99895 268 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 DESI2Q9BSY9 194 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 SPATA16Q9BXB7 569 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 PRKD2Q9BZL6 878 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 NIF3L1Q9GZT8 377 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 EHD4Q9H223 541 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 ATP13A3Q9H7F0 1226 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 CAAP1Q9H8G2 361 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 HOMER2Q9NSB8 354 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 HAUS2Q9NVX0 235 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 ASNSD1Q9NWL6 643 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 MRPL39Q9NYK5 338 aaKnown RBP4.32□□□□□ -1.72
PTPN22-202ENST00000420377 SENP1Q9P0U3 644 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 VTI1BQ9UEU0 232 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 KLHL3Q9UH77 587 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 CPA4Q9UI42 421 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 SH3BGRL2Q9UJC5 107 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 TMX2Q9Y320 296 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 KMT2EQ8IZD2 1858 aa4.32□□□□□ -1.72
PTPN22-202ENST00000420377 ATAD5Q96QE3 1844 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 SH3D21A4FU49 640 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 AXIN1O15169 862 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 ADAM11O75078 769 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 MAFO75444 373 aaPredicted RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 GPC4O75487 556 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 KRT1P04264 644 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 RB1P06400 928 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 LTA4HP09960 611 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 SUPT20HL2P0C7V6 817 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CKBP12277 381 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 EEF2P13639 858 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 JAK1P23458 1154 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 ACAT1P24752 427 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 GUCY1A2P33402 732 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 PPP1R2P41236 205 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 RAD52P43351 418 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 ZNF75DP51815 510 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 SRP54P61011 504 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 PPP2R2BQ00005 443 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 EXOSC10Q01780 885 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CACNB2Q08289 660 aaPredicted RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CSTF3Q12996 717 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 ORC1Q13415 861 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 RFTN1Q14699 578 aaPredicted RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CNPY1Q3B7I2 92 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CYP27C1Q4G0S4 372 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 PLEKHG4Q58EX7 1191 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 INTS11Q5TA45 600 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 RNF220Q5VTB9 566 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 FOXB2Q5VYV0 432 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 APOBEC3HQ6NTF7 200 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 PPP1R2P3Q6NXS1 205 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 TMEM154Q6P9G4 183 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 MAMDC4Q6UXC1 1216 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 C4orf22Q6V702 233 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CCDC149Q6ZUS6 474 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CYP4V2Q6ZWL3 525 aaPredicted RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 DPP9Q86TI2 863 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 ALYREFQ86V81 257 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 TREML1Q86YW5 311 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CCNYL1Q8N7R7 359 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 IGSF22Q8N9C0 903 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 SLC4A11Q8NBS3 891 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 FBXO30Q8TB52 745 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CALML6Q8TD86 181 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 SEPT1Q8WYJ6 367 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CMTM3Q96MX0 182 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 KIFC3Q9BVG8 833 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 RHOBTB2Q9BYZ6 727 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 NT5C3AQ9H0P0 336 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 RUBCNLQ9H714 662 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 ELAC1Q9H777 363 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 TMEM206Q9H813 350 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 MBIPQ9NS73 344 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 BAIAP2L1Q9UHR4 511 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 PTBP2Q9UKA9 531 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 DENND2AQ9ULE3 1009 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CHTOPQ9Y3Y2 248 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 CACNG2Q9Y698 323 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 STON1Q9Y6Q2 735 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 SLC12A8A0AV02 714 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 WDR91A4D1P6 747 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 VWA3AA6NCI4 1184 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 UBXN8O00124 270 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 SCAMP3O14828 347 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 XPO1O14980 1071 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 POLR2DO15514 142 aaKnown RBP4.31□□□□□ -1.72
PTPN22-202ENST00000420377 PALMO75781 387 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 WFS1O76024 890 aa4.31□□□□□ -1.72
PTPN22-202ENST00000420377 PDE5AO76074 875 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms