RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SPEM1Q8N4L4 309 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 NELFBQ8WX92 580 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 TATDN2Q93075 761 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 CHFRQ96EP1 664 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 FAM126AQ9BYI3 521 aaPredicted RBP17.43■□□□□ 0.38
LINC00404-201ENST00000418660 FBXO44Q9H4M3 255 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 CISHQ9NSE2 258 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 PCDHGA2Q9Y5H1 932 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 CPQQ9Y646 472 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 LMNAP02545 664 aaKnown RBP17.42■□□□□ 0.38
LINC00404-201ENST00000418660 ZDHHC11BP0C7U3 371 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 GJA4P35212 333 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 CXCL12P48061 93 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 TUBP50607 506 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 GRSF1Q12849 480 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC00404-201ENST00000418660 NR1H3Q13133 447 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 ZNF394Q53GI3 561 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 CLEC20AQ6ZU45 233 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 DDX42Q86XP3 938 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC00404-201ENST00000418660 ZBTB44Q8NCP5 570 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 EXOC4Q96A65 974 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 HEXIM2Q96MH2 286 aaKnown RBP17.42■□□□□ 0.38
LINC00404-201ENST00000418660 LINC00597Q9H2U6 94 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 PNPLA8Q9NP80 782 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 ZSCAN32Q9NX65 697 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 SMPD4Q9NXE4 827 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 GMIPQ9P107 970 aa17.42■□□□□ 0.38
LINC00404-201ENST00000418660 HHLA1C9JL84 531 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 COCHO43405 550 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 MBL2P11226 248 aaPredicted RBP17.41■□□□□ 0.38
LINC00404-201ENST00000418660 TDGF1P13385 188 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 FMO5P49326 533 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 RAD23BP54727 409 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 NRLP54845 237 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 SATB1Q01826 763 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 PPP1R26Q5T8A7 1209 aaPredicted RBP17.41■□□□□ 0.38
LINC00404-201ENST00000418660 FSTL4Q6MZW2 842 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 Q6ZS52 159 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 TRIML1Q8N9V2 468 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 SLC4A11Q8NBS3 891 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 ATRIPQ8WXE1 791 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 TMEM176AQ96HP8 235 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 ARID3AQ99856 593 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 DUSP16Q9BY84 665 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 CTNND2Q9UQB3 1225 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 CACNA1IQ9P0X4 2223 aa17.41■□□□□ 0.38
LINC00404-201ENST00000418660 SLC9A3R1O14745 358 aaPredicted RBP17.4■□□□□ 0.38
LINC00404-201ENST00000418660 PMM2O15305 246 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 PAPSS2O95340 614 aaPredicted RBP17.4■□□□□ 0.38
LINC00404-201ENST00000418660 NFATC1O95644 943 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
LINC00404-201ENST00000418660 GALK1P51570 392 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 PAK1Q13153 545 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 CUL2Q13617 745 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 GPRIN1Q7Z2K8 1008 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 P2RY13Q9BPV8 354 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 CCSER2Q9H7U1 834 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 FBRSL1Q9HCM7 1045 aaKnown RBP17.4■□□□□ 0.38
LINC00404-201ENST00000418660 TLR8Q9NR97 1041 aaKnown RBP17.4■□□□□ 0.38
LINC00404-201ENST00000418660 KIAA1468Q9P260 1216 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 CFAP97Q9P2B7 532 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 SCML2Q9UQR0 700 aa17.4■□□□□ 0.38
LINC00404-201ENST00000418660 ZFHX2Q9C0A1 2572 aaPredicted RBP17.4■□□□□ 0.38
LINC00404-201ENST00000418660 HELZP42694 1942 aaKnown RBP17.39■□□□□ 0.37
LINC00404-201ENST00000418660 LILRB5O75023 590 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 GNA14O95837 355 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 ACO1P21399 889 aaKnown RBP17.39■□□□□ 0.37
LINC00404-201ENST00000418660 DRD1P21728 446 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 STX17P56962 302 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 YWHAEP62258 255 aaKnown RBP17.39■□□□□ 0.37
LINC00404-201ENST00000418660 CAMK4Q16566 473 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 ARHGAP17Q68EM7 881 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 ADGRG2Q8IZP9 1017 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 CD101Q93033 1021 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 JAKMIP2Q96AA8 810 aa17.39■□□□□ 0.37
LINC00404-201ENST00000418660 ZFRQ96KR1 1074 aaKnown RBP17.39■□□□□ 0.37
LINC00404-201ENST00000418660 E2F8A0AVK6 867 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 P4HA2O15460 535 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 TLR5O60602 858 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 EGFP01133 1207 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 TBXAS1P24557 533 aaPredicted RBP17.38■□□□□ 0.37
LINC00404-201ENST00000418660 PGFP49763 221 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 KIF11P52732 1056 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 CETN1Q12798 172 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 FBXO43Q4G163 708 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 NAIF1Q69YI7 327 aaPredicted RBP17.38■□□□□ 0.37
LINC00404-201ENST00000418660 SUMF1Q8NBK3 374 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 SRRTQ9BXP5 876 aaKnown RBP17.38■□□□□ 0.37
LINC00404-201ENST00000418660 UBXN6Q9BZV1 441 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 NACA2Q9H009 215 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 CYLDQ9NQC7 956 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 TBC1D14Q9P2M4 693 aa17.38■□□□□ 0.37
LINC00404-201ENST00000418660 FANCMQ8IYD8 2048 aa17.37■□□□□ 0.37
LINC00404-201ENST00000418660 ATG13O75143 517 aa17.37■□□□□ 0.37
LINC00404-201ENST00000418660 FGFR1OPO95684 399 aaKnown RBP17.37■□□□□ 0.37
LINC00404-201ENST00000418660 MARSP56192 900 aaKnown RBP17.37■□□□□ 0.37
LINC00404-201ENST00000418660 LRMPQ12912 555 aa17.37■□□□□ 0.37
LINC00404-201ENST00000418660 CCDC186Q7Z3E2 898 aa17.37■□□□□ 0.37
LINC00404-201ENST00000418660 TRIM59Q8IWR1 403 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms