RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 A1BGP04217 495 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 NR2F6P10588 404 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 MYL4P12829 197 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 ZFXP17010 805 aaPredicted RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 PRKAR1BP31321 381 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 CLCN2P51788 898 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 ATXN1P54253 815 aaKnown RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 INHBCP55103 352 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 RHBDL3P58872 404 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 TGFB2P61812 414 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 SP2Q02086 613 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 BTKQ06187 659 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 DPTQ07507 201 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 PMS2P11Q13670 270 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 BMPR2Q13873 1038 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 CCNIQ14094 377 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 RALBP1Q15311 655 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 NPY5RQ15761 445 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 ZNF750Q32MQ0 723 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 PTCHD3Q3KNS1 767 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 ARL13BQ3SXY8 428 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 IZUMO3Q5VZ72 239 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 RRAGBQ5VZM2 374 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 PLAG1Q6DJT9 500 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 FCRL6Q6DN72 434 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 HIBCHQ6NVY1 386 aaPredicted RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 CATSPERGQ6ZRH7 1159 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 MAVSQ7Z434 540 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 PEG10Q86TG7 708 aaKnown RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 MORC1Q86VD1 984 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 ABRAQ8N0Z2 381 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 TXLNBQ8N3L3 684 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 SAMD3Q8N6K7 520 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 FANCBQ8NB91 859 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 CCDC150Q8NCX0 1101 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 DEPTORQ8TB45 409 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 TMEM171Q8WVE6 324 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 BRI3BPQ8WY22 251 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 GLG1Q92896 1179 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 LRRC46Q96FV0 321 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 SGCZQ96LD1 299 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 MPHOSPH6Q99547 160 aaKnown RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 EIF2AQ9BY44 585 aaKnown RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 CERS4Q9HA82 394 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 GBA2Q9HCG7 927 aaPredicted RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 HEYLQ9NQ87 328 aaPredicted RBP3.15□□□□□ -1.91
VPS41-206ENST00000418457 FNIP2Q9P278 1114 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 DKK4Q9UBT3 224 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 CAPN11Q9UMQ6 739 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 CEP83Q9Y592 693 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 SNX14Q9Y5W7 946 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 DAPK1P53355 1430 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 UHRF1BP1Q6BDS2 1440 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 KAT6AQ92794 2004 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 ADGRL2O95490 1459 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 GAPVD1Q14C86 1478 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 IFT140Q96RY7 1462 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 KDM6BO15054 1643 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 LAMC1P11047 1609 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 ADCY10Q96PN6 1610 aa3.15□□□□□ -1.91
VPS41-206ENST00000418457 POLR2AP24928 1970 aaKnown RBP3.14□□□□□ -1.91
VPS41-206ENST00000418457 KDM5DQ9BY66 1539 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 BCORL1Q5H9F3 1711 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 KIAA1107Q9UPP5 1409 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 A0A087X1B8 175 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 A1L4Q6 167 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 FGF18O76093 207 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 URI1O94763 535 aaPredicted RBP3.14□□□□□ -1.91
VPS41-206ENST00000418457 ONECUT2O95948 504 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 HARSP12081 509 aaKnown RBP3.14□□□□□ -1.91
VPS41-206ENST00000418457 EPHA3P29320 983 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 SERPINB3P29508 390 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 CXCR5P32302 372 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 PLA2G5P39877 138 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 GRIA3P42263 894 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 HTR3AP46098 478 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 ALDH9A1P49189 494 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 MTHFSP49914 203 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 MAPK10P53779 464 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 BCAT1P54687 386 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 STK3Q13188 491 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 OS9Q13438 667 aaPredicted RBP3.14□□□□□ -1.91
VPS41-206ENST00000418457 ZNF169Q14929 603 aaPredicted RBP3.14□□□□□ -1.91
VPS41-206ENST00000418457 ERCC6LQ2NKX8 1250 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 PLAC9Q5JTB6 97 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 TREML2Q5T2D2 321 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 SLC9A4Q6AI14 798 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 XRRA1Q6P2D8 792 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 MZT2AQ6P582 158 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 TOGARAM2Q6ZUX3 1019 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 KRT28Q7Z3Y7 464 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 IZUMO1Q8IYV9 350 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 VGLL2Q8N8G2 317 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 SOCS4Q8WXH5 440 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 RFKQ969G6 155 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 KIAA1191Q96A73 305 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 PDLIM2Q96JY6 352 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 ZNF668Q96K58 619 aaPredicted RBP3.14□□□□□ -1.91
VPS41-206ENST00000418457 C17orf80Q9BSJ5 609 aa3.14□□□□□ -1.91
VPS41-206ENST00000418457 MAGEB5Q9BZ81 275 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms