RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 MON1AQ86VX9 555 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 NUP93Q8N1F7 819 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 FIBCD1Q8N539 461 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 COLGALT1Q8NBJ5 622 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 TTC13Q8NBP0 860 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 ZMIZ2Q8NF64 920 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 CCDC26Q8TAB7 109 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 ZNF461Q8TAF7 563 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 RXFP2Q8WXD0 754 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 OVCA2Q8WZ82 227 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 ALG3Q92685 438 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 BADQ92934 168 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 SAMD11Q96NU1 681 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 YME1L1Q96TA2 773 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 RXFP1Q9HBX9 757 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 METTL5Q9NRN9 209 aaKnown RBP10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 ABCC13Q9NSE7 274 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 RCOR3Q9P2K3 495 aaPredicted RBP10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 AFF4Q9UHB7 1163 aaKnown RBP10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 SCML2Q9UQR0 700 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 IRAK3Q9Y616 596 aa10.59□□□□□ -0.71
HMGA1P6-201ENST00000418454 F8VP50 259 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 GOLGA8SH3BPF8 625 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 I3L4J1 428 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 ZNF185O15231 689 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 UPP2O95045 317 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 HAPLN1P10915 354 aaPredicted RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 PYGMP11217 842 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 BDNFP23560 247 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 CHRNA3P32297 505 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 GBP1P32455 592 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 SSTR3P32745 418 aaPredicted RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 HTR7P34969 479 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 GRIK1P39086 918 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 OGDHQ02218 1023 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 SLC25A11Q02978 314 aaKnown RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 LMNB2Q03252 620 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 ZNF252P-AS1Q0IIN9 211 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 RAB33AQ14088 237 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 LONRF2Q1L5Z9 754 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 PAN2Q504Q3 1202 aaKnown RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 ODF2Q5BJF6 829 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 PDE12Q6L8Q7 609 aaKnown RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 KIAA1841Q6NSI8 718 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 WDR93Q6P2C0 686 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 SYDE1Q6ZW31 735 aaPredicted RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 SLC13A5Q86YT5 568 aaPredicted RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 C12orf50Q8NA57 414 aaPredicted RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 JOSD2Q8TAC2 188 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 SLCO2A1Q92959 643 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 PKNOX2Q96KN3 472 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 CDK5RAP1Q96SZ6 601 aaKnown RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 NPY6RQ99463 290 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 LBHD1Q9BQE6 289 aaPredicted RBP10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 FAM129AQ9BZQ8 928 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 LRRC19Q9H756 370 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 CLIC5Q9NZA1 410 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 CACNG4Q9UBN1 327 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 USP18Q9UMW8 372 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 SLC4A7Q9Y6M7 1214 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 MICAL3Q7RTP6 2002 aa10.58□□□□□ -0.72
HMGA1P6-201ENST00000418454 UQCRHLA0A096LP55 91 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 C5orf67F2Z3F1 127 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 TULP2O00295 520 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 PDE2AO00408 941 aaPredicted RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 CLDN5O00501 218 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 KRIT1O00522 736 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 HCRTO43612 131 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 PRPSAP2O60256 369 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 LILRB3O75022 631 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 BEST1O76090 585 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 TRUB2O95900 331 aaKnown RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 FGGP02679 453 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 UQCRHP07919 91 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 LCP1P13796 627 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 ATF2P15336 505 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 ZFXP17010 805 aaPredicted RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 CXCR5P32302 372 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 HCAR3P49019 387 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 FNTAP49354 379 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 GLUD2P49448 558 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 RGS7P49802 495 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 DRG2P55039 364 aaKnown RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 DEFB103AP81534 67 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 ADIGQ0VDE8 80 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 NNTQ13423 1086 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 DHX34Q14147 1143 aaKnown RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 CCNG2Q16589 344 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 SLC39A12Q504Y0 691 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 C2CD6Q53TS8 623 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 TFDP3Q5H9I0 405 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 ERMARDQ5T6L9 678 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 SNX30Q5VWJ9 437 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 HERC6Q8IVU3 1022 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 PDZD8Q8NEN9 1154 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 HASPINQ8TF76 798 aa10.57□□□□□ -0.72
HMGA1P6-201ENST00000418454 HNRNPLLQ8WVV9 542 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms