RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 TTC39BQ5VTQ0 682 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 TDRD10Q5VZ19 366 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 B3GNT6Q6ZMB0 384 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 NIPA1Q7RTP0 329 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 TMC7Q7Z402 723 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SLC26A11Q86WA9 606 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 C4orf19Q8IY42 314 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 PDIK1LQ8N165 341 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 ARFGAP1Q8N6T3 406 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 ACTRT2Q8TDY3 377 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 JADE3Q92613 823 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 TEKT1Q969V4 418 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 RBM17Q96I25 401 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 AGBL1Q96MI9 1066 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 KCNH7Q9NS40 1196 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 PLK2Q9NYY3 685 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 UBAP1Q9NZ09 502 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 PCDHAC2Q9Y5I4 1007 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 RGPD3A6NKT7 1758 aaPredicted RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 RGPD4Q7Z3J3 1758 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 C15orf38-AP3S2A0A0A6YYH1 394 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 I3L4J1 428 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 CYB561D2O14569 222 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 BIRC5O15392 142 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 SPAG6O75602 509 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 BPGMP07738 259 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 INHBAP08476 426 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 WEE2P0C1S8 567 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 CDK4P11802 303 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 GNA15P30679 374 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 HIRAP54198 1017 aaPredicted RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 CACNB3P54284 484 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 ALDH18A1P54886 795 aaKnown RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 TMPRSS15P98073 1019 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 SLC25A11Q02978 314 aaKnown RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 MTM1Q13496 603 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 DPYSL3Q14195 570 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 PIGHQ14442 188 aaPredicted RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 KCNJ11Q14654 390 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 PSMD6Q15008 389 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 TLR1Q15399 786 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 RBM44Q6ZP01 1051 aaKnown RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 TAS1R3Q7RTX0 852 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 POLNQ7Z5Q5 900 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 ARPINQ7Z6K5 226 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 USP37Q86T82 979 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 KBTBD6Q86V97 674 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 APBB2Q92870 758 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 ZDHHC15Q96MV8 337 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 EHMT1Q9H9B1 1298 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 AGO4Q9HCK5 861 aaKnown RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 SMYD2Q9NRG4 433 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 ITGA11Q9UKX5 1188 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 PCDHGA4Q9Y5G9 962 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 PTPRJQ12913 1337 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 HMX2A2RU54 273 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 CXorf49A8MYA2 514 aaPredicted RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 PGM3O95394 542 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 CAPNS1P04632 268 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 SNRPAP09012 282 aaKnown RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 PRKCHP24723 683 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 IL1R2P27930 398 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 FDFT1P37268 417 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 STAT2P52630 851 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 PLCB3Q01970 1234 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 FOLH1Q04609 750 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 TCP10Q12799 353 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 LRRC36Q1X8D7 754 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 MMEL1Q495T6 779 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.18□□□□□ -1.1
VRK2-203ENST00000417641 NADK2Q4G0N4 442 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 LMBRD2Q68DH5 695 aaPredicted RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 BORAQ6PGQ7 559 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 KLHDC10Q6PID8 442 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 ATG14Q6ZNE5 492 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 WDTC1Q8N5D0 677 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 TTC13Q8NBP0 860 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 GAB3Q8WWW8 586 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 DNAJC1Q96KC8 554 aaKnown RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 MRIQ9BWK5 157 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 SENP6Q9GZR1 1112 aaPredicted RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 ZNF696Q9H7X3 374 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 COL20A1Q9P218 1284 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 POMPQ9Y244 141 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 MRPL11Q9Y3B7 192 aaKnown RBP8.18□□□□□ -1.1
VRK2-203ENST00000417641 UBIAD1Q9Y5Z9 338 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 MAD1L1Q9Y6D9 718 aa8.18□□□□□ -1.1
VRK2-203ENST00000417641 TTC36A6NLP5 189 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 CST8O60676 142 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 DNAJA2O60884 412 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 KLHL2O95198 593 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 GH2P01242 217 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 HSD17B4P51659 736 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 DEUP1Q05D60 604 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 APOFQ13790 326 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 DBN1Q16643 649 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 MYLK3Q32MK0 819 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 SH2D4BQ5SQS7 431 aa8.17□□□□□ -1.1
VRK2-203ENST00000417641 FAM102BQ5T8I3 360 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms