RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HOMER3Q9NSC5 361 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 ATP8A2Q9NTI2 1148 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 RBM12Q9NTZ6 932 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 CPSF2Q9P2I0 782 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 STK39Q9UEW8 545 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 SFMBT1Q9UHJ3 866 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 PNMA2Q9UL42 364 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 PIAS3Q9Y6X2 628 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 CREBBPQ92793 2442 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 RELNP78509 3460 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 ATXN2Q99700 1313 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 MYO5AQ9Y4I1 1855 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 DOPEY2Q9Y3R5 2298 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 NOTCH2Q04721 2471 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 MBLAC1A4D2B0 266 aaPredicted RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 SNUPNO95149 360 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 MYBP10242 640 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 MYF5P13349 255 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 GCFC2P16383 781 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 ENGP17813 658 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 UBA1P22314 1058 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 ECI1P42126 302 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 GABREP78334 506 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 PPFIA1Q13136 1202 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 KCNV1Q6PIU1 500 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 CRTC3Q6UUV7 619 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 TOGARAM2Q6ZUX3 1019 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 KCTD1Q719H9 257 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 ZNF765Q7L2R6 523 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 TMPRSS7Q7RTY8 843 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 BRAPQ7Z569 592 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 FGD2Q7Z6J4 655 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 TRIM74Q86UV6 250 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 TRIM73Q86UV7 250 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 LRRTM3Q86VH5 581 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 ZNF280BQ86YH2 543 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 JAMLQ86YT9 394 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 UBR7Q8N806 425 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 ACRBPQ8NEB7 543 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 PIWIL2Q8TC59 973 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 ENOX1Q8TC92 643 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 GPT2Q8TD30 523 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 EXOC4Q96A65 974 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 CEP95Q96GE4 821 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 IGSF21Q96ID5 467 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 ARPC5LQ9BPX5 153 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 TRIM6Q9C030 488 aaPredicted RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 CAAP1Q9H8G2 361 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 MLXIPQ9HAP2 919 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 MRPL17Q9NRX2 175 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 INTS7Q9NVH2 962 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 MTMR4Q9NYA4 1195 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 MAGEC2Q9UBF1 373 aaPredicted RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 STOML1Q9UBI4 398 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 NDOR1Q9UHB4 597 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 BLOC1S6Q9UL45 172 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 MAN2B2Q9Y2E5 1009 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 PTPRQQ9UMZ3 2332 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 CELSR3Q9NYQ7 3312 aa6□□□□□ -1.45
ECHDC1-206ENST00000417628 URB1O60287 2271 aaKnown RBP6□□□□□ -1.45
ECHDC1-206ENST00000417628 ABCB11O95342 1321 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 PTPRCP08575 1304 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 KIAA1217Q5T5P2 1943 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 PLXNB3Q9ULL4 1909 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 COL6A6A6NMZ7 2263 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 E9PAM4 449 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 ARNTLO00327 626 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 AURKAO14965 403 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 OPHN1O60890 802 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 ZC3H11AO75152 810 aaKnown RBP eCLIP5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 AFPP02771 609 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 F13BP05160 661 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 GSNP06396 782 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 FAM163BP0C2L3 166 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 ITIH2P19823 946 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 CCNE1P24864 410 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 TNFRSF8P28908 595 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 ATXN3P54252 364 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 CORO7P57737 925 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 TMEM62Q0P6H9 643 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 SCRN1Q12765 414 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 IFT88Q13099 833 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 MAPK6Q16659 721 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 DGKKQ5KSL6 1271 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 ODR4Q5SWX8 454 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 ZKSCAN2Q63HK3 967 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 PMS2CLQ68D20 193 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 HIST2H2BCQ6DN03 193 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 C1orf228Q6PIY5 440 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 ATG14Q6ZNE5 492 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 C10orf67Q8IYJ2 551 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 MFSD4AQ8N468 514 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 DAGLBQ8NCG7 672 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 BCL7CQ8WUZ0 217 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 TP53INP1Q96A56 240 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 MSANTD3Q96H12 275 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 DBNDD2Q9BQY9 259 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 CRACR2AQ9BSW2 395 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 PI4K2AQ9BTU6 479 aa5.99□□□□□ -1.45
ECHDC1-206ENST00000417628 CELF4Q9BZC1 486 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms