RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 PKN3Q6P5Z2 889 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 FAM186BQ8IYM0 893 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 CCDC150Q8NCX0 1101 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 OTUB2Q96DC9 234 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 LOXL4Q96JB6 756 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 DUSP9Q99956 384 aaKnown RBP19.53■□□□□ 0.72
VPS16-204ENST00000417508 GOLPH3LQ9H4A5 285 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 CHORDC1Q9UHD1 332 aaPredicted RBP19.53■□□□□ 0.72
VPS16-204ENST00000417508 USP18Q9UMW8 372 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 FRYLO94915 3013 aa19.53■□□□□ 0.72
VPS16-204ENST00000417508 ZDHHC11BP0C7U3 371 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 ASPAP45381 313 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 SLC5A3P53794 718 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 INCA1Q0VD86 236 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 IFRD2Q12894 506 aaPredicted RBP19.52■□□□□ 0.72
VPS16-204ENST00000417508 BECN1Q14457 450 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 LPAL2Q16609 132 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 CACNA2D4Q7Z3S7 1137 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.52■□□□□ 0.72
VPS16-204ENST00000417508 FILIP1Q7Z7B0 1213 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 SCAMP5Q8TAC9 235 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 GAB3Q8WWW8 586 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 HNRNPABQ99729 332 aaKnown RBP19.52■□□□□ 0.72
VPS16-204ENST00000417508 GTPBP4Q9BZE4 634 aaKnown RBP19.52■□□□□ 0.72
VPS16-204ENST00000417508 MAPK8IP1Q9UQF2 711 aa19.52■□□□□ 0.72
VPS16-204ENST00000417508 STX10O60499 249 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 OPRD1P41143 372 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 EIF2DP41214 584 aaKnown RBP19.51■□□□□ 0.71
VPS16-204ENST00000417508 SPEM2Q0P670 501 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 DHCR24Q15392 516 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 ZCWPW2Q504Y3 356 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 TTC39CQ8N584 583 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 RPLP0P6Q8NHW5 317 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 SLC2A14Q8TDB8 520 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 SMOQ99835 787 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 NT5C1AQ9BXI3 368 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 FAM124BQ9H5Z6 455 aaPredicted RBP19.51■□□□□ 0.71
VPS16-204ENST00000417508 TMEM8AQ9HCN3 771 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 PARD6AQ9NPB6 346 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 KRT82Q9NSB4 513 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 RMND1Q9NWS8 449 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 SMPD4Q9NXE4 827 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 CFAP97Q9P2B7 532 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 EBF1Q9UH73 591 aa19.51■□□□□ 0.71
VPS16-204ENST00000417508 MYOFQ9NZM1 2061 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 A0A0A0MRY4 1105 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 GOLGA6L4A6NEF3 574 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 COCHO43405 550 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 RPP40O75818 363 aaKnown RBP19.5■□□□□ 0.71
VPS16-204ENST00000417508 ADH1CP00326 375 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 CYP17A1P05093 508 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 GCLMP48507 274 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 NUCB2P80303 420 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 PPP3CAQ08209 521 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 SRSF5Q13243 272 aaKnown RBP19.5■□□□□ 0.71
VPS16-204ENST00000417508 CSRP2Q16527 193 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 NAIF1Q69YI7 327 aaPredicted RBP19.5■□□□□ 0.71
VPS16-204ENST00000417508 KRT39Q6A163 491 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 SPOPLQ6IQ16 392 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 FAM160A2Q8N612 972 aaPredicted RBP19.5■□□□□ 0.71
VPS16-204ENST00000417508 ZMIZ2Q8NF64 920 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 ELMO3Q96BJ8 720 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 GSDMAQ96QA5 445 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 PNPLA8Q9NP80 782 aa19.5■□□□□ 0.71
VPS16-204ENST00000417508 TLR8Q9NR97 1041 aaKnown RBP19.5■□□□□ 0.71
VPS16-204ENST00000417508 AXIN1O15169 862 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 CETN3O15182 167 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 APBB3O95704 486 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 FAM200BP0CF97 657 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 CCDC130P13994 396 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 MAP3K7CLP57077 242 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 MRPS21P82921 87 aaKnown RBP19.49■□□□□ 0.71
VPS16-204ENST00000417508 DMC1Q14565 340 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 COBLL1Q53SF7 1204 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 RHBDF2Q6PJF5 856 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 C12orf29Q8N999 325 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 TAS1R2Q8TE23 839 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 USP33Q8TEY7 942 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 EZH1Q92800 747 aaPredicted RBP19.49■□□□□ 0.71
VPS16-204ENST00000417508 CYFIP2Q96F07 1278 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 ZC3H10Q96K80 434 aaKnown RBP19.49■□□□□ 0.71
VPS16-204ENST00000417508 RTKNQ9BST9 563 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 NIF3L1Q9GZT8 377 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 GDPD2Q9HCC8 539 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 SEMA4GQ9NTN9 838 aa19.49■□□□□ 0.71
VPS16-204ENST00000417508 CDV3Q9UKY7 258 aaKnown RBP19.49■□□□□ 0.71
VPS16-204ENST00000417508 K7EQS6 105 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 BEST1O76090 585 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 TRIM49P0CI25 452 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 TRIM49CP0CI26 452 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 CCDC192P0DO97 292 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 GAB4Q2WGN9 574 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 HSF5Q4G112 596 aaPredicted RBP19.48■□□□□ 0.71
VPS16-204ENST00000417508 PREPLQ4J6C6 727 aaPredicted RBP19.48■□□□□ 0.71
VPS16-204ENST00000417508 FMR1NBQ8N0W7 255 aaPredicted RBP19.48■□□□□ 0.71
VPS16-204ENST00000417508 ZFRQ96KR1 1074 aaKnown RBP19.48■□□□□ 0.71
VPS16-204ENST00000417508 PNKPQ96T60 521 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 NACA2Q9H009 215 aa19.48■□□□□ 0.71
VPS16-204ENST00000417508 APOBEC3GQ9HC16 384 aaKnown RBP19.48■□□□□ 0.71
VPS16-204ENST00000417508 FAM49BQ9NUQ9 324 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms