RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 ANKRD40Q6AI12 368 aa18.94■□□□□ 0.62
CPNE1-210ENST00000416778 PDZD8Q8NEN9 1154 aa18.94■□□□□ 0.62
CPNE1-210ENST00000416778 ERCC4Q92889 916 aaPredicted RBP18.94■□□□□ 0.62
CPNE1-210ENST00000416778 CD101Q93033 1021 aa18.94■□□□□ 0.62
CPNE1-210ENST00000416778 CYFIP2Q96F07 1278 aa18.94■□□□□ 0.62
CPNE1-210ENST00000416778 TIGD1Q96MW7 591 aa18.94■□□□□ 0.62
CPNE1-210ENST00000416778 HINFPQ9BQA5 517 aa18.94■□□□□ 0.62
CPNE1-210ENST00000416778 SMPD4Q9NXE4 827 aa18.94■□□□□ 0.62
CPNE1-210ENST00000416778 KIF26AQ9ULI4 1882 aaPredicted RBP18.94■□□□□ 0.62
CPNE1-210ENST00000416778 COCHO43405 550 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 ID4P47928 161 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 MAP3K7CLP57077 242 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 FBXO43Q4G163 708 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 HECTD3Q5T447 861 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 HEATR6Q6AI08 1181 aaKnown RBP18.93■□□□□ 0.62
CPNE1-210ENST00000416778 RHBDF2Q6PJF5 856 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 FILIP1Q7Z7B0 1213 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 ELOA2Q8IYF1 753 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-210ENST00000416778 EXOC4Q96A65 974 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 ZFRQ96KR1 1074 aaKnown RBP18.93■□□□□ 0.62
CPNE1-210ENST00000416778 NT5C1AQ9BXI3 368 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 MMRN2Q9H8L6 949 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 KRT82Q9NSB4 513 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 FAM49BQ9NUQ9 324 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 POLR3BQ9NW08 1133 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-210ENST00000416778 CFAP97Q9P2B7 532 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 NCDNQ9UBB6 729 aa18.93■□□□□ 0.62
CPNE1-210ENST00000416778 HHLA1C9JL84 531 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 RNF40O75150 1001 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 CILPO75339 1184 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 SMC2O95347 1197 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 NFATC1O95644 943 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 MBL2P11226 248 aaPredicted RBP18.92■□□□□ 0.62
CPNE1-210ENST00000416778 OPRD1P41143 372 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 PMS1P54277 932 aaKnown RBP18.92■□□□□ 0.62
CPNE1-210ENST00000416778 SRSF5Q13243 272 aaKnown RBP18.92■□□□□ 0.62
CPNE1-210ENST00000416778 WDR5BQ86VZ2 330 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 ZC3H3Q8IXZ2 948 aaKnown RBP18.92■□□□□ 0.62
CPNE1-210ENST00000416778 FAXDC2Q96IV6 333 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 IMPG2Q9BZV3 1241 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 NIF3L1Q9GZT8 377 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 CCSER2Q9H7U1 834 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 RAB20Q9NX57 234 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 GMIPQ9P107 970 aa18.92■□□□□ 0.62
CPNE1-210ENST00000416778 E2F8A0AVK6 867 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 SLC9A3R1O14745 358 aaPredicted RBP18.91■□□□□ 0.62
CPNE1-210ENST00000416778 ADORA2BP29275 332 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 TUBP50607 506 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 FKBP3Q00688 224 aaKnown RBP18.91■□□□□ 0.62
CPNE1-210ENST00000416778 SIM2Q14190 667 aaPredicted RBP18.91■□□□□ 0.62
CPNE1-210ENST00000416778 DHCR24Q15392 516 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 CLEC20AQ6ZU45 233 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 GPR161Q8N6U8 529 aaKnown RBP18.91■□□□□ 0.62
CPNE1-210ENST00000416778 FBXL13Q8NEE6 735 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 TATDN2Q93075 761 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 RMDN1Q96DB5 314 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 FBXO44Q9H4M3 255 aa18.91■□□□□ 0.62
CPNE1-210ENST00000416778 A0A0A0MRY4 1105 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 CCDC163A0A0D9SF12 145 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 K7EQS6 105 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 STX10O60499 249 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 FAM200BP0CF97 657 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 EPB41P11171 864 aaKnown RBP18.9■□□□□ 0.62
CPNE1-210ENST00000416778 CD58P19256 250 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 SLC6A11P48066 632 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 PXNP49023 591 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-210ENST00000416778 LPAL2Q16609 132 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 DDX42Q86XP3 938 aaKnown RBP eCLIP18.9■□□□□ 0.62
CPNE1-210ENST00000416778 CAMKK1Q8N5S9 505 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 CCDC150Q8NCX0 1101 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 SECISBP2LQ93073 1101 aaKnown RBP18.9■□□□□ 0.62
CPNE1-210ENST00000416778 SMARCE1Q969G3 411 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 GTPBP4Q9BZE4 634 aaKnown RBP18.9■□□□□ 0.62
CPNE1-210ENST00000416778 TBC1D14Q9P2M4 693 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 SLC8A2Q9UPR5 921 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 SCML2Q9UQR0 700 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 COQ4Q9Y3A0 265 aa18.9■□□□□ 0.62
CPNE1-210ENST00000416778 CEP250Q9BV73 2442 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 ANTXRLA6NF34 631 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 SCAMP3O14828 347 aaKnown RBP18.89■□□□□ 0.61
CPNE1-210ENST00000416778 TBX18O95935 607 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 CYP17A1P05093 508 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 LAIR1Q6GTX8 287 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 PRR23BQ6ZRT6 265 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 SYT13Q7L8C5 426 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 GPRIN1Q7Z2K8 1008 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 RPLP0P6Q8NHW5 317 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 WBP2Q969T9 261 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 HEXIM2Q96MH2 286 aaKnown RBP18.89■□□□□ 0.61
CPNE1-210ENST00000416778 TSG101Q99816 390 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 DUSP9Q99956 384 aaKnown RBP18.89■□□□□ 0.61
CPNE1-210ENST00000416778 DUSP16Q9BY84 665 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 PARD6AQ9NPB6 346 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 OSER1Q9NX31 292 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 RAB23Q9ULC3 237 aa18.89■□□□□ 0.61
CPNE1-210ENST00000416778 ATG2BQ96BY7 2078 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 SLC16A3O15427 465 aaKnown RBP18.88■□□□□ 0.61
CPNE1-210ENST00000416778 RETP07949 1114 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 TRIM21P19474 475 aaKnown RBP18.88■□□□□ 0.61
CPNE1-210ENST00000416778 MXI1P50539 228 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms