RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 HESX1Q9UBX0 185 aa14.4□□□□□ -0.1
CPNE1-209ENST00000415920 TSPAN16Q9UKR8 245 aa14.4□□□□□ -0.1
CPNE1-209ENST00000415920 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPNE1-209ENST00000415920 HELZP42694 1942 aaKnown RBP14.4□□□□□ -0.1
CPNE1-209ENST00000415920 FAM170AA1A519 330 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 SHISA7A6NL88 538 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 O00370 1275 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 PRRG1O14668 218 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 AP1G2O75843 785 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 FAM200BP0CF97 657 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 BDNFP23560 247 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 ELF1P32519 619 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 KLHL30Q0D2K2 578 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 RAB33AQ14088 237 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 STILQ15468 1287 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 SLC44A4Q53GD3 710 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 TPGS2Q68CL5 300 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 FAM171BQ6P995 826 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 FUKQ8N0W3 1084 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 SUMF1Q8NBK3 374 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 ATAD1Q8NBU5 361 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 OR8K1Q8NGG5 319 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 C2orf15Q8WU43 125 aaKnown RBP14.39□□□□□ -0.11
CPNE1-209ENST00000415920 SMARCD1Q96GM5 515 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 DNAJC7Q99615 494 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 ZSWIM1Q9BR11 485 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 SEMA4AQ9H3S1 761 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 CYP4F11Q9HBI6 524 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 ZNHIT6Q9NWK9 470 aaKnown RBP14.39□□□□□ -0.11
CPNE1-209ENST00000415920 AFF4Q9UHB7 1163 aaKnown RBP14.39□□□□□ -0.11
CPNE1-209ENST00000415920 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
CPNE1-209ENST00000415920 KANSL1LA0AUZ9 987 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 SOAT2O75908 522 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 MICAL2O94851 1124 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 VNN2O95498 520 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 PTMAP06454 111 aaKnown RBP14.38□□□□□ -0.11
CPNE1-209ENST00000415920 MMEP08473 750 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 SKILP12757 684 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 HOXA9P31269 272 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 BCAT1P54687 386 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 SMARCB1Q12824 385 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 UBXN2BQ14CS0 331 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 CFAP221Q4G0U5 840 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 SCN4BQ8IWT1 228 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-209ENST00000415920 TC2NQ8N9U0 490 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 ZNF461Q8TAF7 563 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 FUBP3Q96I24 572 aaKnown RBP eCLIP14.38□□□□□ -0.11
CPNE1-209ENST00000415920 HNRNPABQ99729 332 aaKnown RBP14.38□□□□□ -0.11
CPNE1-209ENST00000415920 HINFPQ9BQA5 517 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 CRISPLD1Q9H336 500 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 HAUS4Q9H6D7 363 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 SPATA6Q9NWH7 488 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-209ENST00000415920 AIPL1Q9NZN9 384 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 NOCTQ9UK39 431 aaKnown RBP14.38□□□□□ -0.11
CPNE1-209ENST00000415920 KIAA1257Q9ULG3 409 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 SLC27A5Q9Y2P5 690 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 YIPF1Q9Y548 306 aa14.38□□□□□ -0.11
CPNE1-209ENST00000415920 ZFP37Q9Y6Q3 630 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-209ENST00000415920 FRYLO94915 3013 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 FAM170BA6NMN3 283 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 SEC24AO95486 1093 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 SERPING1P05155 500 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 ATF2P15336 505 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 CEBPBP17676 345 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 CYP2F1P24903 491 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 TARSP26639 723 aaKnown RBP14.37□□□□□ -0.11
CPNE1-209ENST00000415920 ANXA13P27216 316 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 GPR15P49685 360 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 CACNA2D1P54289 1103 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 GSDMDP57764 484 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 CDR2Q01850 454 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 BST2Q10589 180 aaKnown RBP14.37□□□□□ -0.11
CPNE1-209ENST00000415920 DUSP4Q13115 394 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 PABPC1LQ4VXU2 614 aaKnown RBP14.37□□□□□ -0.11
CPNE1-209ENST00000415920 SMYD5Q6GMV2 418 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 DENND1BQ6P3S1 775 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 TSSK4Q6SA08 328 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 TTC30AQ86WT1 665 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 UBA3Q8TBC4 463 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 ZNF606Q8WXB4 792 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 SYN2Q92777 582 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-209ENST00000415920 SECISBP2LQ93073 1101 aaKnown RBP14.37□□□□□ -0.11
CPNE1-209ENST00000415920 MCRS1Q96EZ8 462 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 DEF6Q9H4E7 631 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 ABCB6Q9NP58 842 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 LTB4R2Q9NPC1 389 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 DMAP1Q9NPF5 467 aaPredicted RBP14.37□□□□□ -0.11
CPNE1-209ENST00000415920 INSL5Q9Y5Q6 135 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 COL4A2P08572 1712 aa14.37□□□□□ -0.11
CPNE1-209ENST00000415920 NUP210Q8TEM1 1887 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-209ENST00000415920 NCOR2Q9Y618 2525 aa14.36□□□□□ -0.11
CPNE1-209ENST00000415920 TRIM66O15016 1216 aa14.36□□□□□ -0.11
CPNE1-209ENST00000415920 XYLBO75191 536 aa14.36□□□□□ -0.11
CPNE1-209ENST00000415920 ABLIM3O94929 683 aa14.36□□□□□ -0.11
CPNE1-209ENST00000415920 PLEKP08567 350 aaPredicted RBP14.36□□□□□ -0.11
CPNE1-209ENST00000415920 POU2F2P09086 479 aa14.36□□□□□ -0.11
CPNE1-209ENST00000415920 SETSIPP0DME0 302 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms