RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 KIF20AO95235 890 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 ASS1P00966 412 aaKnown RBP16.48■□□□□ 0.23
ACTB-202ENST00000414620 ADORA2BP29275 332 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 GCLMP48507 274 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 MAP3K7CLP57077 242 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 CCDC6Q16204 474 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 GAB4Q2WGN9 574 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 FBXO43Q4G163 708 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 SMYD4Q8IYR2 804 aaPredicted RBP16.48■□□□□ 0.23
ACTB-202ENST00000414620 C12orf29Q8N999 325 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 PDZD8Q8NEN9 1154 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 ZMIZ2Q8NF64 920 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 TMEM174Q8WUU8 243 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 GAB3Q8WWW8 586 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 TWNKQ96RR1 684 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 SMOQ99835 787 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 SCAND2PQ9GZW5 306 aaPredicted RBP16.48■□□□□ 0.23
ACTB-202ENST00000414620 CCSER2Q9H7U1 834 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 SEMA4GQ9NTN9 838 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 ATP6V1DQ9Y5K8 247 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 MYO18AQ92614 2054 aaKnown RBP16.47■□□□□ 0.23
ACTB-202ENST00000414620 TNFRSF10BO14763 440 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 AXIN1O15169 862 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 COCHO43405 550 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 IRF1P10914 325 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 KRT13P13646 458 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 HOXA6P31267 233 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 ATXN1P54253 815 aaKnown RBP16.47■□□□□ 0.23
ACTB-202ENST00000414620 PPP3CAQ08209 521 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 DMC1Q14565 340 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 DHCR24Q15392 516 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 KBTBD6Q86V97 674 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 FAM186BQ8IYM0 893 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 TAS1R2Q8TE23 839 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 TAF4BQ92750 862 aa16.47■□□□□ 0.23
ACTB-202ENST00000414620 APOBEC3GQ9HC16 384 aaKnown RBP16.47■□□□□ 0.23
ACTB-202ENST00000414620 CEP250Q9BV73 2442 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.46■□□□□ 0.23
ACTB-202ENST00000414620 PRR5-ARHGAP8B1AHC4 643 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 IKBKBO14920 756 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 CD58P19256 250 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 SLC6A11P48066 632 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 ARHGAP8P85298 464 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 KDSRQ06136 332 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 PNOCQ13519 176 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 NFIL3Q16649 462 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 C2orf27AQ580R0 203 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 HECTD3Q5T447 861 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 PRR23CQ6ZRP0 262 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 INTS8Q75QN2 995 aaKnown RBP16.46■□□□□ 0.23
ACTB-202ENST00000414620 SYT13Q7L8C5 426 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 C12orf40Q86WS4 652 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 SFTPA1Q8IWL2 248 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 GUF1Q8N442 669 aaKnown RBP16.46■□□□□ 0.23
ACTB-202ENST00000414620 OVCA2Q8WZ82 227 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 ACDQ96AP0 544 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 EEF2KMTQ96G04 330 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 IMPG2Q9BZV3 1241 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 NACA2Q9H009 215 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 ARRDC1-AS1Q9H2J1 176 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 SH3BP1Q9Y3L3 701 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 FRYLO94915 3013 aa16.46■□□□□ 0.23
ACTB-202ENST00000414620 CEP192Q8TEP8 1941 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 K7EQS6 105 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 SLC9A3R1O14745 358 aaPredicted RBP16.45■□□□□ 0.22
ACTB-202ENST00000414620 MAPK13O15264 365 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 PSMC2P35998 433 aaKnown RBP16.45■□□□□ 0.22
ACTB-202ENST00000414620 PGFP49763 221 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 ADAM9Q13443 819 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 GPRIN1Q7Z2K8 1008 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 CACNA2D4Q7Z3S7 1137 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 UNC93AQ86WB7 457 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 DDX42Q86XP3 938 aaKnown RBP eCLIP16.45■□□□□ 0.222e-24■□□□□ 9.3
ACTB-202ENST00000414620 CRYBG2Q8N1P7 616 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 CCDC33Q8N5R6 958 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 CAMKK1Q8N5S9 505 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 USP33Q8TEY7 942 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 WBP2Q969T9 261 aa16.45■□□□□ 0.22
ACTB-202ENST00000414620 ZFRQ96KR1 1074 aaKnown RBP16.45■□□□□ 0.22
ACTB-202ENST00000414620 CCDC163A0A0D9SF12 145 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 DCDC2BA2VCK2 349 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 DCLK1O15075 740 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 GDF9O60383 454 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 LRP3O75074 770 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 APBB3O95704 486 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 FAM200BP0CF97 657 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 ADH5P11766 374 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 RPL13P26373 211 aaKnown RBP16.44■□□□□ 0.22
ACTB-202ENST00000414620 DGKEP52429 567 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 MESP2Q0VG99 397 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 CSRP2Q16527 193 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 ZCWPW2Q504Y3 356 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 RHBDF2Q6PJF5 856 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 CLEC20AQ6ZU45 233 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 TTC30AQ86WT1 665 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 ADGRG2Q8IZP9 1017 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 ABCA7Q8IZY2 2146 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 TSTD1Q8NFU3 115 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 TPSD1Q9BZJ3 242 aa16.44■□□□□ 0.22
ACTB-202ENST00000414620 NIF3L1Q9GZT8 377 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms