RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PDGFRAP16234 1089 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 DDX5P17844 614 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ATP5JP18859 108 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 HLA-DPA1P20036 260 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 IL10P22301 178 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 KELP23276 732 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 S100A1P23297 94 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 U2AF2P26368 475 aaKnown RBP eCLIP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 GNA15P30679 374 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CYP2C19P33261 490 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 KRT2P35908 639 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 MLH1P40692 756 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 EIF1AXP47813 144 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 DIO1P49895 249 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 SLC8A3P57103 927 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 NLRP5P59047 1200 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 B2MP61769 119 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 TMPRSS15P98073 1019 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 PPFIA1Q13136 1202 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ITGB3BPQ13352 177 aaPredicted RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 DYNC1I2Q13409 638 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CUL3Q13618 768 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CYLC2Q14093 348 aaPredicted RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 SCARB2Q14108 478 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 KRT32Q14532 448 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 MAPRE2Q15555 327 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CRY1Q16526 586 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 HADHQ16836 314 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ZNF423Q2M1K9 1284 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 TM4SF20Q53R12 229 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 FBXO48Q5FWF7 155 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CFAP157Q5JU67 520 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 KRBOX4Q5JUW0 171 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CREB3L3Q68CJ9 461 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CCDC62Q6P9F0 684 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ARHGAP36Q6ZRI8 547 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 BNIPLQ7Z465 357 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 VPS36Q86VN1 386 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 HEATR4Q86WZ0 1026 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ZSWIM9Q86XI8 627 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 REXO1Q8N1G1 1221 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CBARPQ8N350 705 aaPredicted RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 FAM181AQ8N9Y4 354 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ZBTB8BQ8NAP8 495 aaPredicted RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 GOLM1Q8NBJ4 401 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 PCSK9Q8NBP7 692 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ZBTB44Q8NCP5 570 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 PIP4K2CQ8TBX8 421 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 SSH3Q8TE77 659 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 TRPC4APQ8TEL6 797 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 THAP3Q8WTV1 239 aaPredicted RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 RNF139Q8WU17 664 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CACTINQ8WUQ7 758 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 HSPH1Q92598 858 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ARHGAP45Q92619 1136 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 KIFAP3Q92845 792 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CUL5Q93034 780 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ATP2A3Q93084 1043 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 FAM149B1Q96BN6 582 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 SEC16BQ96JE7 1060 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 HRASLS5Q96KN8 279 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 IFT74Q96LB3 600 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CFAP57Q96MR6 1250 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 TSNARE1Q96NA8 513 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 WDR24Q96S15 920 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 OSBPL9Q96SU4 736 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 MNTQ99583 582 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 TTC1Q99614 292 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 SPON2Q9BUD6 331 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CARD9Q9H257 536 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 SMARCAD1Q9H4L7 1026 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 MMRN2Q9H8L6 949 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 WDR6Q9NNW5 1121 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ARFGAP3Q9NP61 516 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 C8orf4Q9NR00 106 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 LATS2Q9NRM7 1088 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 KRT84Q9NSB2 600 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 TRMT13Q9NUP7 481 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 MOCS1Q9NZB8 636 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ZSWIM5Q9P217 1185 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 FNIP2Q9P278 1114 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 MBD2Q9UBB5 411 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 TUBGCP4Q9UGJ1 667 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 FBXO40Q9UH90 709 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 CPA4Q9UI42 421 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 FOXD3Q9UJU5 478 aaPredicted RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 AGO2Q9UKV8 859 aaKnown RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 POLIQ9UNA4 740 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 COG5Q9UP83 839 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ZNF148Q9UQR1 794 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 GPR52Q9Y2T5 361 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 GIT1Q9Y2X7 761 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ZFP37Q9Y6Q3 630 aaPredicted RBP4.16□□□□□ -1.74
LINC01048-201ENST00000414480 OTOFQ9HC10 1997 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 ZNF804BA4D1E1 1349 aa4.16□□□□□ -1.74
LINC01048-201ENST00000414480 A0A1B0GVC2 190 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 FAM221AA4D161 298 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 EME2A4GXA9 379 aaPredicted RBP4.15□□□□□ -1.75
LINC01048-201ENST00000414480 LRRC14BA6NHZ5 514 aa4.15□□□□□ -1.75
LINC01048-201ENST00000414480 DDX39AO00148 427 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms