RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ARHGAP44Q17R89 818 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 ANO6Q4KMQ2 910 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 LCLAT1Q6UWP7 414 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 C11orf57Q6ZUT1 292 aaPredicted RBP15.51■□□□□ 0.07
CHD1-202ENST00000414220 PIGZQ86VD9 579 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 KIAA1958Q8N8K9 716 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 CYP2S1Q96SQ9 504 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 BPIFA3Q9BQP9 254 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 SMG9Q9H0W8 520 aaKnown RBP15.51■□□□□ 0.07
CHD1-202ENST00000414220 KCNH6Q9H252 994 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 TAB2Q9NYJ8 693 aa15.51■□□□□ 0.07
CHD1-202ENST00000414220 KANSL1LA0AUZ9 987 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 KRBA1A5PL33 1030 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 O00370 1275 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 SLC9A3R1O14745 358 aaPredicted RBP15.5■□□□□ 0.07
CHD1-202ENST00000414220 CAVIN2O95810 425 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 TCF3P15923 654 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 AVPR2P30518 371 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 IFNAR2P48551 515 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 BPIFB4P59827 614 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 PTK2Q05397 1052 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 NR1H3Q13133 447 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 MTF1Q14872 753 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 CDKAL1Q5VV42 579 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 TPRG1Q6ZUI0 275 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 SIX6OS1Q8N1H7 587 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 SH3RF2Q8TEC5 729 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 KAT5Q92993 513 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 KREMEN1Q96MU8 473 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 VPS16Q9H269 839 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 TBC1D17Q9HA65 648 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 HEBP1Q9NRV9 189 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 GKN1Q9NS71 199 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 GMIPQ9P107 970 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 DNAJC12Q9UKB3 198 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 CNTN6Q9UQ52 1028 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 SIT1Q9Y3P8 196 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 DAAM1Q9Y4D1 1078 aa15.5■□□□□ 0.07
CHD1-202ENST00000414220 HHLA1C9JL84 531 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 M0QYV0 167 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 OAS1P00973 400 aaKnown RBP15.49■□□□□ 0.07
CHD1-202ENST00000414220 ZDHHC11BP0C7U3 371 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 AOC1P19801 751 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 ATP5C1P36542 298 aaKnown RBP15.49■□□□□ 0.07
CHD1-202ENST00000414220 PLA2G4AP47712 749 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 TKTL1P51854 596 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 PDE4CQ08493 712 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 KRT31Q15323 416 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 ITPRIPL2Q3MIP1 535 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 FILIP1LQ4L180 1135 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 MIIPQ5JXC2 388 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 CCDC186Q7Z3E2 898 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 UBA3Q8TBC4 463 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 GOLGA1Q92805 767 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 RSPRY1Q96DX4 576 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 PCMTD1Q96MG8 357 aaPredicted RBP15.49■□□□□ 0.07
CHD1-202ENST00000414220 OSBPL6Q9BZF3 934 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 NAGPAQ9UK23 515 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 SH3BP1Q9Y3L3 701 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 CPQQ9Y646 472 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 PIAS3Q9Y6X2 628 aa15.49■□□□□ 0.07
CHD1-202ENST00000414220 THAP12O43422 761 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 TLR5O60602 858 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 OLFM2O95897 454 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 ZBED1O96006 694 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 PDGFBP01127 241 aaPredicted RBP15.48■□□□□ 0.07
CHD1-202ENST00000414220 COL9A1P20849 921 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 GNA15P30679 374 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 ZNF165P49910 485 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 ZNF132P52740 706 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 SNX16P57768 344 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 RUNX3Q13761 415 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 UBXN2BQ14CS0 331 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 TTC30AQ86WT1 665 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 RALGPS2Q86X27 583 aaPredicted RBP15.48■□□□□ 0.07
CHD1-202ENST00000414220 CPA6Q8N4T0 437 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 AOPEPQ8N6M6 819 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 OSCP1Q8WVF1 389 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 KCTD13Q8WZ19 329 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 FAM3CQ92520 227 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 HSFY1Q96LI6 401 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 SLC22A12Q96S37 553 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 IRF2BPLQ9H1B7 796 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 DUS2Q9NX74 493 aaKnown RBP15.48■□□□□ 0.07
CHD1-202ENST00000414220 CLIC5Q9NZA1 410 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 TBC1D14Q9P2M4 693 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 LIMA1Q9UHB6 759 aaKnown RBP15.48■□□□□ 0.07
CHD1-202ENST00000414220 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHD1-202ENST00000414220 CCL26Q9Y258 94 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 USP3Q9Y6I4 520 aa15.48■□□□□ 0.07
CHD1-202ENST00000414220 PTPRDP23468 1912 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 SYCE3A1L190 88 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 RNF225M0QZC1 329 aaPredicted RBP15.47■□□□□ 0.07
CHD1-202ENST00000414220 LEFTY2O00292 366 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 CYP26A1O43174 497 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 COCHO43405 550 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 TECTAO75443 2155 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 NFATC1O95644 943 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 RARGP13631 454 aa15.47■□□□□ 0.07
CHD1-202ENST00000414220 BRD2P25440 801 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms