RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 FAM200BP0CF97 657 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 HOXC13P31276 330 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 ZXDBP98169 803 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 EDRF1Q3B7T1 1238 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 WDR5BQ86VZ2 330 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 FMR1NBQ8N0W7 255 aaPredicted RBP17.8■□□□□ 0.44
COL6A2-205ENST00000413758 RPLP0P6Q8NHW5 317 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 RMDN1Q96DB5 314 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 SMOQ99835 787 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 NT5C1AQ9BXI3 368 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 CYP3A43Q9HB55 503 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 TMEM8AQ9HCN3 771 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 COMMD8Q9NX08 183 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 HOOK1Q9UJC3 728 aaKnown RBP17.8■□□□□ 0.44
COL6A2-205ENST00000413758 SH3BP1Q9Y3L3 701 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 GVINP1Q7Z2Y8 2422 aa17.8■□□□□ 0.44
COL6A2-205ENST00000413758 ATG2BQ96BY7 2078 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 MYH10P35580 1976 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 COCHO43405 550 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 OLFM2O95897 454 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 SEC13P55735 322 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 SPEM2Q0P670 501 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 TCERG1LQ5VWI1 586 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 KRT39Q6A163 491 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 CCDC26Q8TAB7 109 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 SMARCE1Q969G3 411 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 ACDQ96AP0 544 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 FBXO44Q9H4M3 255 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 CCSER2Q9H7U1 834 aa17.79■□□□□ 0.44
COL6A2-205ENST00000413758 APOBEC3GQ9HC16 384 aaKnown RBP17.79■□□□□ 0.44
COL6A2-205ENST00000413758 POLR3BQ9NW08 1133 aaPredicted RBP17.79■□□□□ 0.44
COL6A2-205ENST00000413758 BEST1O76090 585 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 CYP17A1P05093 508 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 IRF1P10914 325 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 HOXA6P31267 233 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 GTF2H1P32780 548 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 PRCPP42785 496 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 MXI1P50539 228 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 ENPEPQ07075 957 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 DHCR24Q15392 516 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 RSPO4Q2I0M5 234 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-205ENST00000413758 ZCWPW2Q504Y3 356 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 DCAF17Q5H9S7 520 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-205ENST00000413758 ZNF658Q5TYW1 1059 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-205ENST00000413758 ERCC4Q92889 916 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-205ENST00000413758 CYFIP2Q96F07 1278 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 HHIPQ96QV1 700 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 TWNKQ96RR1 684 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 TLR8Q9NR97 1041 aaKnown RBP17.78■□□□□ 0.44
COL6A2-205ENST00000413758 TBC1D14Q9P2M4 693 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 OTOGLQ3ZCN5 2332 aa17.78■□□□□ 0.44
COL6A2-205ENST00000413758 DMDP11532 3685 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 RPP40O75818 363 aaKnown RBP17.77■□□□□ 0.44
COL6A2-205ENST00000413758 ADH1CP00326 375 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 RETP07949 1114 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 INCA1Q0VD86 236 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 ZNF394Q53GI3 561 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 DGLUCYQ7Z3D6 616 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 ADGRG2Q8IZP9 1017 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 FBXL13Q8NEE6 735 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 ZMIZ2Q8NF64 920 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 HEXIM2Q96MH2 286 aaKnown RBP17.77■□□□□ 0.44
COL6A2-205ENST00000413758 GSDMAQ96QA5 445 aa17.77■□□□□ 0.44
COL6A2-205ENST00000413758 HNRNPABQ99729 332 aaKnown RBP17.77■□□□□ 0.44
COL6A2-205ENST00000413758 E2F8A0AVK6 867 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 ADH5P11766 374 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 ACO1P21399 889 aaKnown RBP17.76■□□□□ 0.43
COL6A2-205ENST00000413758 OPRD1P41143 372 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 TUBP50607 506 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 FOXK2Q01167 660 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 LMNB2Q03252 620 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 STIM1Q13586 685 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 DMC1Q14565 340 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 PUM1Q14671 1186 aaKnown RBP eCLIP17.76■□□□□ 0.43
COL6A2-205ENST00000413758 C2orf27AQ580R0 203 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 CLEC20AQ6ZU45 233 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 ERMP1Q7Z2K6 904 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 CAMKK1Q8N5S9 505 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 KIAA1958Q8N8K9 716 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 GAB3Q8WWW8 586 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 EZH1Q92800 747 aaPredicted RBP17.76■□□□□ 0.43
COL6A2-205ENST00000413758 SEMA4DQ92854 862 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 CSNK1G1Q9HCP0 422 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 RAB20Q9NX57 234 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 IL37Q9NZH6 218 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 PCDHA5Q9Y5H7 936 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 GPR179Q6PRD1 2367 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 SPTBN4Q9H254 2564 aa17.76■□□□□ 0.43
COL6A2-205ENST00000413758 AXIN1O15169 862 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 CYP26A1O43174 497 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 TLR5O60602 858 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 CILPO75339 1184 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 APODP05090 189 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 SLC6A11P48066 632 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 KDSRQ06136 332 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 SNX30Q5VWJ9 437 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 BTBD8Q5XKL5 378 aa17.75■□□□□ 0.43
COL6A2-205ENST00000413758 ANKRD40Q6AI12 368 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms