RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FAM92AA1XBS5 289 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 SRRM3A6NNA2 597 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 TULP1O00294 542 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 HOXC11O43248 304 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 TGFB1I1O43294 461 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 COCHO43405 550 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 PTPN1P18031 435 aaKnown RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 ITPKAP23677 461 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 STAT6P42226 847 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 DPP6P42658 865 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 KDSRQ06136 332 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 E2F4Q16254 413 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 UAP1L1Q3KQV9 507 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 LY6G5CQ5SRR4 150 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 SNX30Q5VWJ9 437 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 TDRD10Q5VZ19 366 aaKnown RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 LYSMD4Q5XG99 296 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 FAM173BQ6P4H8 233 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 ARMCX6Q7L4S7 300 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 EPM2AIP1Q7L775 607 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 KCNV2Q8TDN2 545 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 NOC3LQ8WTT2 800 aaKnown RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 HMGB4Q8WW32 186 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 OVCA2Q8WZ82 227 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 HPS3Q969F9 1004 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 SLITRK1Q96PX8 696 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 MMS19Q96T76 1030 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 CGRRF1Q99675 332 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 XYLT2Q9H1B5 865 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 CAPN10Q9HC96 672 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 KIAA1586Q9HCI6 787 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 TBC1D14Q9P2M4 693 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 R3HCC1Q9Y3T6 440 aaKnown RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 NEUROG3Q9Y4Z2 214 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 GON4LQ3T8J9 2241 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 FASNP49327 2511 aaKnown RBP12.93□□□□□ -0.34
LIMS2-210ENST00000413578 A0A1W2PQF6 199 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 VPS37CA5D8V6 355 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-210ENST00000413578 FAM221BA6H8Z2 402 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 CLDN5O00501 218 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 EIF3DO15371 548 aaKnown RBP eCLIP12.93□□□□□ -0.34
LIMS2-210ENST00000413578 HYAL3O43820 417 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-210ENST00000413578 GREM1O60565 184 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 ZDHHC11BP0C7U3 371 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 MBL2P11226 248 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-210ENST00000413578 HOXB3P14651 431 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-210ENST00000413578 GABRG2P18507 467 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 MAPK8P45983 427 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 GAD2Q05329 585 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 PSMD6Q15008 389 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 SLC39A14Q15043 492 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 SNRNP35Q16560 246 aaKnown RBP12.93□□□□□ -0.34
LIMS2-210ENST00000413578 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 PAQR9Q6ZVX9 377 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 TTC30AQ86WT1 665 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 CCDC65Q8IXS2 484 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 NUP93Q8N1F7 819 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 B3GALNT2Q8NCR0 500 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 PDZD8Q8NEN9 1154 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 ZNF516Q92618 1163 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 WBP2Q969T9 261 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 USP28Q96RU2 1077 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 B3GNT5Q9BYG0 378 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 PANK2Q9BZ23 570 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 TRIM9Q9C026 710 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 SNX25Q9H3E2 840 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 AGPAT3Q9NRZ7 376 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 KBTBD4Q9NVX7 518 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 MSRB2Q9Y3D2 182 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 STARD13Q9Y3M8 1113 aa12.93□□□□□ -0.34
LIMS2-210ENST00000413578 THADAQ6YHU6 1953 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 SMG1Q96Q15 3661 aaKnown RBP12.92□□□□□ -0.34
LIMS2-210ENST00000413578 ATXN2Q99700 1313 aaKnown RBP12.92□□□□□ -0.34
LIMS2-210ENST00000413578 MAP3K13O43283 966 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 TULP3O75386 442 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 RTN3O95197 1032 aaPredicted RBP12.92□□□□□ -0.34
LIMS2-210ENST00000413578 CAPNS1P04632 268 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 SERPINF2P08697 491 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 DLATP10515 647 aaKnown RBP12.92□□□□□ -0.34
LIMS2-210ENST00000413578 YWHAQP27348 245 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 TUBP50607 506 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 CYP24A1Q07973 514 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 EHHADHQ08426 723 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 BYSLQ13895 437 aaKnown RBP12.92□□□□□ -0.34
LIMS2-210ENST00000413578 KIAA1211LQ6NV74 962 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 CNNM4Q6P4Q7 775 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 HS2ST1Q7LGA3 356 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 BBS7Q8IWZ6 715 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 ZNF513Q8N8E2 541 aaPredicted RBP12.92□□□□□ -0.34
LIMS2-210ENST00000413578 TERB1Q8NA31 727 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 OR6B3Q8NGW1 331 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 ZNF507Q8TCN5 953 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 KCNK16Q96T55 309 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 SLC32A1Q9H598 525 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 VRTNQ9H8Y1 702 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 FSCN3Q9NQT6 498 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms