RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 HESX1Q9UBX0 185 aa17.12■□□□□ 0.33
DDR1-230ENST00000412274 FBXO4Q9UKT5 387 aa17.12■□□□□ 0.33
DDR1-230ENST00000412274 COL4A2P08572 1712 aa17.12■□□□□ 0.33
DDR1-230ENST00000412274 MIA3Q5JRA6 1907 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 TICRRQ7Z2Z1 1910 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 ANAPC1Q9H1A4 1944 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 LAMTOR5O43504 91 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 NFATC1O95644 943 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 CD72P21854 359 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 CTHP32929 405 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 IFRD2Q12894 506 aaPredicted RBP17.11■□□□□ 0.33
DDR1-230ENST00000412274 ZNF528Q3MIS6 628 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 SGO2Q562F6 1265 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 CCDC26Q8TAB7 109 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 LMO3Q8TAP4 145 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 OTUB2Q96DC9 234 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 SLC22A12Q96S37 553 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 SEMA4AQ9H3S1 761 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 THAP9Q9H5L6 903 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 GTSE1Q9NYZ3 720 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 TBC1D14Q9P2M4 693 aa17.11■□□□□ 0.33
DDR1-230ENST00000412274 CHORDC1Q9UHD1 332 aaPredicted RBP17.11■□□□□ 0.33
DDR1-230ENST00000412274 MTF2Q9Y483 593 aaPredicted RBP17.11■□□□□ 0.33
DDR1-230ENST00000412274 KIF26AQ9ULI4 1882 aaPredicted RBP17.11■□□□□ 0.33
DDR1-230ENST00000412274 GTPBP10A4D1E9 387 aaKnown RBP17.1■□□□□ 0.33
DDR1-230ENST00000412274 SHISA7A6NL88 538 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 H0Y858 1186 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 LEFTY2O00292 366 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 BEST1O76090 585 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 MBD3O95983 291 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 ACO1P21399 889 aaKnown RBP17.1■□□□□ 0.33
DDR1-230ENST00000412274 BCAT1P54687 386 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 GOLGA8FQ08AF8 430 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 GOLGA8DPQ0D2H9 430 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 KLHDC10Q6PID8 442 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 ZC3H14Q6PJT7 736 aaKnown RBP17.1■□□□□ 0.33
DDR1-230ENST00000412274 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 ARHGAP18Q8N392 663 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 PPM1KQ8N3J5 372 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 ZFYVE19Q96K21 471 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
DDR1-230ENST00000412274 ARID3AQ99856 593 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 NACA2Q9H009 215 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 RNF38Q9H0F5 515 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 CHRDQ9H2X0 955 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 LMAN1LQ9HAT1 526 aa17.1■□□□□ 0.33
DDR1-230ENST00000412274 NDRG2Q9UN36 371 aaKnown RBP17.1■□□□□ 0.33
DDR1-230ENST00000412274 E2F8A0AVK6 867 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 HHLA1C9JL84 531 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 PROB1E7EW31 1015 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 MBL2P11226 248 aaPredicted RBP17.09■□□□□ 0.33
DDR1-230ENST00000412274 ATP5C1P36542 298 aaKnown RBP17.09■□□□□ 0.33
DDR1-230ENST00000412274 NBL1P41271 181 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 KIF11P52732 1056 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 TNK2Q07912 1038 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 GRSF1Q12849 480 aaKnown RBP eCLIP17.09■□□□□ 0.33
DDR1-230ENST00000412274 LRMPQ12912 555 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 FZD5Q13467 585 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 UBR7Q8N806 425 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 FAM126AQ9BYI3 521 aaPredicted RBP17.09■□□□□ 0.33
DDR1-230ENST00000412274 EBF3Q9H4W6 596 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 ECT2Q9H8V3 914 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 CYLDQ9NQC7 956 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 HPS4Q9NQG7 708 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 SPATA6Q9NWH7 488 aaPredicted RBP17.09■□□□□ 0.33
DDR1-230ENST00000412274 CLIC5Q9NZA1 410 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 GMIPQ9P107 970 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 CPQQ9Y646 472 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 USP3Q9Y6I4 520 aa17.09■□□□□ 0.33
DDR1-230ENST00000412274 MUC6Q6W4X9 2439 aa17.08■□□□□ 0.33
DDR1-230ENST00000412274 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.33
DDR1-230ENST00000412274 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
DDR1-230ENST00000412274 COCHO43405 550 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 TLR5O60602 858 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 CHRNB1P11230 501 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 DRD1P21728 446 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 CCR3P51677 355 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 BST2Q10589 180 aaKnown RBP17.08■□□□□ 0.32
DDR1-230ENST00000412274 CNGA2Q16280 664 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 EML3Q32P44 896 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 TMEM270Q6UE05 265 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 PCDHB4Q9Y5E5 795 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 WDFY4Q6ZS81 3184 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 MYH10P35580 1976 aa17.08■□□□□ 0.32
DDR1-230ENST00000412274 PATJQ8NI35 1801 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 XPO1O14980 1071 aaKnown RBP17.07■□□□□ 0.32
DDR1-230ENST00000412274 SETSIPP0DME0 302 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 RALAP11233 206 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 CD19P15391 556 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
DDR1-230ENST00000412274 NRLP54845 237 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 MFAP3P55082 362 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 FBXO43Q4G163 708 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 RAB41Q5JT25 222 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 LCLAT1Q6UWP7 414 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 GBP6Q6ZN66 633 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 CREBRFQ8IUR6 639 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms