RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 ACDQ96AP0 544 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 CCDC34Q96HJ3 373 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 SPAG17Q6Q759 2223 aa23.67■■□□□ 1.38
MSH6-202ENST00000411819 PRR5-ARHGAP8B1AHC4 643 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 SLC9A3R1O14745 358 aaPredicted RBP23.66■■□□□ 1.38
MSH6-202ENST00000411819 MAPK13O15264 365 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 RPP40O75818 363 aaKnown RBP23.66■■□□□ 1.38
MSH6-202ENST00000411819 ZNF202O95125 648 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 CYP17A1P05093 508 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 TGM1P22735 817 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 GCLMP48507 274 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 ARHGAP8P85298 464 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 GUF1Q8N442 669 aaKnown RBP23.66■■□□□ 1.38
MSH6-202ENST00000411819 FAM160A2Q8N612 972 aaPredicted RBP23.66■■□□□ 1.38
MSH6-202ENST00000411819 CHORDC1Q9UHD1 332 aaPredicted RBP23.66■■□□□ 1.38
MSH6-202ENST00000411819 CACNA1AO00555 2505 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 DNAH14Q0VDD8 3507 aa23.66■■□□□ 1.38
MSH6-202ENST00000411819 EML5Q05BV3 1969 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 COCHO43405 550 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 SDHBP21912 280 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 RPL13P26373 211 aaKnown RBP23.65■■□□□ 1.38
MSH6-202ENST00000411819 ADORA2BP29275 332 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 SEC13P55735 322 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 NFIL3Q16649 462 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 HECTD3Q5T447 861 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 UNC93AQ86WB7 457 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 GAB3Q8WWW8 586 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 NACA2Q9H009 215 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 GMIPQ9P107 970 aa23.65■■□□□ 1.38
MSH6-202ENST00000411819 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.65■■□□□ 1.38
MSH6-202ENST00000411819 CCDC163A0A0D9SF12 145 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 TNFRSF10BO14763 440 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 LRP3O75074 770 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 PSMC2P35998 433 aaKnown RBP23.64■■□□□ 1.37
MSH6-202ENST00000411819 OPRD1P41143 372 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 MAP3K7CLP57077 242 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 ADAM9Q13443 819 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 DMC1Q14565 340 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 SYT13Q7L8C5 426 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 CAMKK1Q8N5S9 505 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 C12orf29Q8N999 325 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 TAS1R2Q8TE23 839 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 JAKMIP2Q96AA8 810 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 SMOQ99835 787 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 CCSER2Q9H7U1 834 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 SEMA4GQ9NTN9 838 aa23.64■■□□□ 1.37
MSH6-202ENST00000411819 MYOFQ9NZM1 2061 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 BEST1O76090 585 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 FAM200BP0CF97 657 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 PPP3CAQ08209 521 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 DHCR24Q15392 516 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 SMYD4Q8IYR2 804 aaPredicted RBP23.63■■□□□ 1.37
MSH6-202ENST00000411819 CRYBG2Q8N1P7 616 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 KIAA1958Q8N8K9 716 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 CCDC150Q8NCX0 1101 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 ZMIZ2Q8NF64 920 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 CCDC26Q8TAB7 109 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 SH3BP1Q9Y3L3 701 aa23.63■■□□□ 1.37
MSH6-202ENST00000411819 SDK1Q7Z5N4 2213 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 MED19A0JLT2 244 aaPredicted RBP23.62■■□□□ 1.37
MSH6-202ENST00000411819 AXIN1O15169 862 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 ADH1CP00326 375 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 CD58P19256 250 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 GAB4Q2WGN9 574 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 C2orf27AQ580R0 203 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 CACNA2D4Q7Z3S7 1137 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 ADGRG2Q8IZP9 1017 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 TWNKQ96RR1 684 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 NIF3L1Q9GZT8 377 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 APOBEC3GQ9HC16 384 aaKnown RBP23.62■■□□□ 1.37
MSH6-202ENST00000411819 COMMD8Q9NX08 183 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 TBC1D14Q9P2M4 693 aa23.62■■□□□ 1.37
MSH6-202ENST00000411819 APBB3O95704 486 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 IRF1P10914 325 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 ADH5P11766 374 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 TUBP50607 506 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 INCA1Q0VD86 236 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 PNOCQ13519 176 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 CSRP2Q16527 193 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 ZCWPW2Q504Y3 356 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 PRR23CQ6ZRP0 262 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 KBTBD6Q86V97 674 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 EEF2KMTQ96G04 330 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 ZFRQ96KR1 1074 aaKnown RBP23.61■■□□□ 1.37
MSH6-202ENST00000411819 NT5C1AQ9BXI3 368 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 FBXO44Q9H4M3 255 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 TMEM8AQ9HCN3 771 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 CSNK1G1Q9HCP0 422 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 IL37Q9NZH6 218 aa23.61■■□□□ 1.37
MSH6-202ENST00000411819 E2F8A0AVK6 867 aa23.6■■□□□ 1.37
MSH6-202ENST00000411819 GOLGA6L4A6NEF3 574 aa23.6■■□□□ 1.37
MSH6-202ENST00000411819 ATXN1P54253 815 aaKnown RBP23.6■■□□□ 1.37
MSH6-202ENST00000411819 KDSRQ06136 332 aa23.6■■□□□ 1.37
MSH6-202ENST00000411819 SNX30Q5VWJ9 437 aa23.6■■□□□ 1.37
MSH6-202ENST00000411819 TSTD1Q8NFU3 115 aa23.6■■□□□ 1.37
MSH6-202ENST00000411819 USP33Q8TEY7 942 aa23.6■■□□□ 1.37
MSH6-202ENST00000411819 CYP3A43Q9HB55 503 aa23.6■■□□□ 1.37
MSH6-202ENST00000411819 TLR8Q9NR97 1041 aaKnown RBP23.6■■□□□ 1.37
MSH6-202ENST00000411819 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.59■■□□□ 1.37
MSH6-202ENST00000411819 FAM92AA1XBS5 289 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms