RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 C6P13671 934 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ACAT1P24752 427 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ANXA13P27216 316 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 CDC25AP30304 524 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 OXTRP30559 389 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ABCD1P33897 745 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ACTN2P35609 894 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 GRIK1P39086 918 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 WASP42768 502 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MAGEA11P43364 429 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TRAPPC10P48553 1259 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 LHX1P48742 406 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 CSRP3P50461 194 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 CCT8P50990 548 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 FXR2P51116 673 aaKnown RBP eCLIP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF132P52740 706 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 UCNP55089 124 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 NCKAP1LP55160 1127 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 CXADRP78310 365 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ZXDBP98169 803 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 POU5F1Q01860 360 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 RHDQ02161 417 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TLE3Q04726 772 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 KDSRQ06136 332 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MESP2Q0VG99 397 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TARDBPQ13148 414 aaKnown RBP eCLIP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MAPK7Q13164 816 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 STARD3Q14849 445 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 RTP5Q14D33 572 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SF3A1Q15459 793 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TEAD4Q15561 434 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MAPRE1Q15691 268 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF174Q15697 407 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 PTPRNQ16849 979 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ANO4Q32M45 955 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SV2CQ496J9 727 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 INTS6LQ5JSJ4 861 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 DCAF12L1Q5VU92 463 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 KRT79Q5XKE5 535 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 GRAMD4Q6IC98 578 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SLFN12LQ6IEE8 588 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 VSTM1Q6UX27 236 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 KIAA1324Q6UXG2 1013 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 C4orf50Q6ZRC1 276 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 DENND5BQ6ZUT9 1274 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 METTL3Q86U44 580 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 NT5DC4Q86YG4 428 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MIB1Q86YT6 1006 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ETFBKMTQ8IXQ9 262 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM86AQ8N2M4 240 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 PHTF2Q8N3S3 785 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 PDCL2Q8N4E4 241 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ZCCHC9Q8N567 271 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 KCTD17Q8N5Z5 321 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 NAT16Q8N8M0 369 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 FAM181AQ8N9Y4 354 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TERB1Q8NA31 727 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SNIP1Q8TAD8 396 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SCFD1Q8WVM8 642 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 FGF11Q92914 225 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 KCNN1Q92952 543 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 IGSF8Q969P0 613 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TOE1Q96GM8 510 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SPATA17Q96L03 361 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MRGPRX1Q96LB2 322 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF560Q96MR9 790 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SLITRK1Q96PX8 696 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 XPO6Q96QU8 1125 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ACOX2Q99424 681 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 GABRG3Q99928 467 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 NUP58Q9BVL2 599 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 RUSC1Q9BVN2 902 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 GPR174Q9BXC1 333 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TM6SF1Q9BZW5 370 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 HAPLN2Q9GZV7 340 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 RNF38Q9H0F5 515 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 PCED1AQ9H1Q7 454 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 IL21RQ9HBE5 538 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ITM2CQ9NQX7 267 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SMPD4Q9NXE4 827 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 DDX43Q9NXZ2 648 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 DPP3Q9NY33 737 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 KCND2Q9NZV8 630 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 CFAP97Q9P2B7 532 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MAGEC2Q9UBF1 373 aaPredicted RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 FTSJ1Q9UET6 329 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 EIF2B4Q9UI10 523 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 CPSF3Q9UKF6 684 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 GTF3C4Q9UKN8 822 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 L1RE1Q9UN81 338 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SH3BP1Q9Y3L3 701 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 STARD13Q9Y3M8 1113 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 R3HCC1Q9Y3T6 440 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 C2CD2Q9Y426 696 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 DOPEY1Q5JWR5 2465 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MGAQ8IWI9 3026 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 C2CD3Q4AC94 2353 aa2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 TEP1Q99973 2627 aaKnown RBP2.52□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRRT4C9JH25 899 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms