RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 SPAG7O75391 227 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SPAG6O75602 509 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 VNN1O95497 513 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TROVE2P10155 538 aaKnown RBP eCLIP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ARP10275 920 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 KCNA3P22001 575 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MMP8P22894 467 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 AMPD1P23109 780 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PRKCHP24723 683 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 HSD3B2P26439 372 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MZF1P28698 734 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ABCD1P33897 745 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PCK1P35558 622 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 GRIA2P42262 883 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ARSEP51690 589 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TBX4P57082 545 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PRR20EP86478 221 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PRR20CP86479 221 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PRR20DP86480 221 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PRR20BP86481 221 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PRR20AP86496 221 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SLC25A11Q02978 314 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 CDC16Q13042 620 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 GRM1Q13255 1194 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SNX1Q13596 522 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 APOFQ13790 326 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 KCNJ11Q14654 390 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SHROOM1Q2M3G4 852 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ZACNQ401N2 412 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 FNBP1LQ5T0N5 605 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DHRS4L2Q6PKH6 230 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 UGT2A3Q6UWM9 527 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 BBS12Q6ZW61 710 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CENPUQ71F23 418 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 HAUS6Q7Z4H7 955 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CCDC25Q86WR0 208 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TREML1Q86YW5 311 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CBWD2Q8IUF1 395 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PPIL6Q8IXY8 311 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ATP11CQ8NB49 1132 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 FNIP1Q8TF40 1166 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 JDP2Q8WYK2 163 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 LZICQ8WZA0 190 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PPP1R14BQ96C90 147 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 FGD4Q96M96 766 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 BTBD9Q96Q07 612 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SPOCK3Q9BQ16 436 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TEKT3Q9BXF9 490 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TRIM55Q9BYV6 548 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ZHX3Q9H4I2 956 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DHX33Q9H6R0 707 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 AGO4Q9HCK5 861 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 SAYSD1Q9NPB0 183 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DDX56Q9NY93 547 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 MAP3K20Q9NYL2 800 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 NDUFA13Q9P0J0 144 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DLGAP2Q9P1A6 1054 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 LARSQ9P2J5 1176 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 PI4KBQ9UBF8 816 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CHORDC1Q9UHD1 332 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 IP6K2Q9UHH9 426 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ANGPTL2Q9UKU9 493 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 WDR90Q96KV7 1748 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 COL11A1P12107 1806 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ADGRA2Q96PE1 1338 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DOCK1Q14185 1865 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 A0A1W2PRG0 241 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DDTLA6NHG4 134 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ZNF487B1APH4 448 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 E5RJQ4 531 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 H3BNX3 289 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 K7ENM7 598 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 GPR25O00155 361 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 FCHO1O14526 889 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ZNF195O14628 629 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 RNASEH1O60930 286 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ENTPD3O75355 529 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 HLA-DOAP06340 250 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 IMPDH2P12268 514 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ITGB5P18084 799 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 KRT4P19013 534 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PAX3P23760 479 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PRDX6P30041 224 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 GSTT1P30711 240 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 EIF1AXP47813 144 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 EIF6P56537 245 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ARL4CP56559 192 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 OGDHQ02218 1023 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DSG1Q02413 1049 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TAP1Q03518 808 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SULT2A1Q06520 285 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 WASHC5Q12768 1159 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 NFIAQ12857 509 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 RCN2Q14257 317 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 AOC3Q16853 763 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MUM1Q2TAK8 710 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DNAL1Q4LDG9 190 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 OGFRL1Q5TC84 451 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ANGEL2Q5VTE6 544 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 MARK2Q7KZI7 788 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms