RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 EMBQ6PCB8 327 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 FBXO38Q6PIJ6 1188 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 SPOCD1Q6ZMY3 1216 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 DEFB128Q7Z7B8 93 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 CCDC50Q8IVM0 306 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 CMTR2Q8IYT2 770 aaKnown RBP10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 PRELID2Q8N945 189 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 ATL2Q8NHH9 583 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 FAM71BQ8TC56 605 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 SPPL2BQ8TCT7 592 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 CCHCR1Q8TD31 782 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 PGAP3Q96FM1 320 aaPredicted RBP10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 C8orf48Q96LL4 319 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 SLITRK1Q96PX8 696 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 SLC2A13Q96QE2 648 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 SMOQ99835 787 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 C11orf84Q9BUA3 381 aaPredicted RBP10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 AP1M1Q9BXS5 423 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 KRT82Q9NSB4 513 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 RCOR3Q9P2K3 495 aaPredicted RBP10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 HSFX1Q9UBD0 423 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 TJP2Q9UDY2 1190 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 DNAJB4Q9UDY4 337 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 MAFFQ9ULX9 164 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 DRG1Q9Y295 367 aaKnown RBP10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 PCDHB5Q9Y5E4 795 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 USP3Q9Y6I4 520 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 PTPRDP23468 1912 aa10.8□□□□□ -0.68
SNORD88C-201ENST00000408061 HHLA1C9JL84 531 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 CLDN5O00501 218 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 HEXIM1O94992 359 aaKnown RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 GJB6O95452 261 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 EFEMP2O95967 443 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 GAS8O95995 478 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 ZBED1O96006 694 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 KRT1P04264 644 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 RARAP10276 462 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 RALAP11233 206 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 ZFXP17010 805 aaPredicted RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 IBSPP21815 317 aaPredicted RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 FLT3P36888 993 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 COILP38432 576 aaPredicted RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 CDKN2BP42772 138 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 SLC11A1P49279 550 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 CLCN6P51797 869 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 BCAR1P56945 870 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 DAOAP59103 153 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 DR1Q01658 176 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 ADCY1Q08828 1119 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 ADIGQ0VDE8 80 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 GPR17Q13304 367 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 PPIGQ13427 754 aaKnown RBP eCLIP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 PTPROQ16827 1216 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 USP41Q3LFD5 358 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 CTXN3Q4LDR2 81 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 ERMARDQ5T6L9 678 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 FAM171A1Q5VUB5 890 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 FUT10Q6P4F1 479 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 CCDC137Q6PK04 289 aaKnown RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 KLHL7Q8IXQ5 586 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 ARHGAP18Q8N392 663 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 EMC1Q8N766 993 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 KCTD6Q8NC69 237 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 DIS3LQ8TF46 1054 aaKnown RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 MYLPFQ96A32 169 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 ZNF689Q96CS4 500 aaPredicted RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 PNKPQ96T60 521 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 ERP44Q9BS26 406 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 TTPALQ9BTX7 342 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 DDX47Q9H0S4 455 aaKnown RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 TSPYL1Q9H0U9 437 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 FBXO44Q9H4M3 255 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 IL23AQ9NPF7 189 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 EHD2Q9NZN4 543 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 PRKAG2Q9UGJ0 569 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 DMGDHQ9UI17 866 aaKnown RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 PRG3Q9Y2Y8 225 aaPredicted RBP10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 BACE2Q9Y5Z0 518 aa10.79□□□□□ -0.68
SNORD88C-201ENST00000408061 hCG_1818297A0A087WSY0 165 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 LRRD1A4D1F6 860 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 I3L4J1 428 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 RAD51CO43502 376 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 HCRTO43612 131 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 TBC1D4O60343 1298 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 ITGB1P05556 798 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 LAG3P18627 525 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 BDNFP23560 247 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 IGFBP6P24592 240 aaPredicted RBP10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 PSEN1P49768 467 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 EPHB4P54760 987 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 VSNL1P62760 191 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 RPL10AP62906 217 aaKnown RBP10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 MTA1Q13330 715 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 SIX1Q15475 284 aaPredicted RBP10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 PAN2Q504Q3 1202 aaKnown RBP10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 ACBD5Q5T8D3 534 aaPredicted RBP10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 BBS12Q6ZW61 710 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 HDXQ7Z353 690 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 BNIPLQ7Z465 357 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms