RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 MMRN1Q13201 1228 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 TFDP2Q14188 446 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 PDK2Q15119 407 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 C6orf118Q5T5N4 469 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 UBAP2Q5T6F2 1119 aaKnown RBP25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 AGMOQ6ZNB7 445 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 CLEC4CQ8WTT0 213 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 TEKT4Q8WW24 435 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 CACNG4Q9UBN1 327 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 TPX2Q9ULW0 747 aaKnown RBP25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 APOC4-APOC2K7ER74 178 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 IFNB1P01574 187 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 APOC2P02655 101 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 ACAT1P24752 427 aaKnown RBP25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 HOXD10P28358 340 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 TKTP29401 623 aaKnown RBP25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 PTPN9P43378 593 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 RAB27AP51159 221 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 PTK7Q13308 1070 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 REM2Q8IYK8 340 aaPredicted RBP25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 RSAD2Q8WXG1 361 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 TBCBQ99426 244 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 DDX23Q9BUQ8 820 aaKnown RBP25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 DUSP16Q9BY84 665 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 GABRDO14764 452 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 SCNN1GP51170 649 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 CLCNKBP51801 687 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 AFF1P51825 1210 aaKnown RBP25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 MAGOHP61326 146 aaKnown RBP25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 ITGA7Q13683 1181 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 DPYSL3Q14195 570 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 TTC19Q6DKK2 380 aaPredicted RBP25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 LRRC31Q6UY01 552 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 DSTYKQ6XUX3 929 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 ARCQ7LC44 396 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 RNF180Q86T96 592 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 TMEM86AQ8N2M4 240 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 ZCCHC9Q8N567 271 aaKnown RBP25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 RNF169Q8NCN4 708 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 CAPNS2Q96L46 248 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 MED10Q9BTT4 135 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 OSBPL7Q9BZF2 842 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 ADAM7Q9H2U9 754 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 SRRDQ9UH36 339 aa25.78■■□□□ 1.72
DNMT3A-206ENST00000406659 ACSL3O95573 720 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 TTC4O95801 387 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 IGFBP6P24592 240 aaPredicted RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 RPL9P32969 192 aaKnown RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 EIF3EP60228 445 aaKnown RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 ZSCAN26Q16670 478 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 EFHC1Q5JVL4 640 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 FUKQ8N0W3 1084 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 PGM2Q96G03 612 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 PWWP2AQ96N64 755 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 DDX43Q9NXZ2 648 aaKnown RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 SMIM23A6NLE4 172 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 MCF2LO15068 1137 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 RGS16O15492 202 aaPredicted RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 ZNF623O75123 536 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 CABYRO75952 493 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 LHX1P48742 406 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 LPIN1Q14693 890 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 MDH1BQ5I0G3 518 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 TLCD1Q96CP7 247 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 ROPN1BQ9BZX4 212 aaPredicted RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 ROPN1Q9HAT0 212 aaPredicted RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 GPATCH2LQ9NWQ4 482 aa25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 DDX20Q9UHI6 824 aaKnown RBP25.77■■□□□ 1.72
DNMT3A-206ENST00000406659 CLDN5O00501 218 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 RASGRF2O14827 1237 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 MGEA5O60502 916 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 IBSPP21815 317 aaPredicted RBP25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 PPP2R2AP63151 447 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 MORF4L2Q15014 288 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 KYNUQ16719 465 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 DEFB115Q30KQ5 88 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 PIGZQ86VD9 579 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 RNF157Q96PX1 679 aa25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 SNRNP25Q9BV90 132 aaKnown RBP25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.76■■□□□ 1.71
DNMT3A-206ENST00000406659 PECAM1P16284 738 aaPredicted RBP25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 NPR3P17342 541 aa25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 RDXP35241 583 aaKnown RBP25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 HDAC4P56524 1084 aa25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 DSC3Q14574 896 aa25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 ZC3H12AQ5D1E8 599 aaKnown RBP25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 SPATA18Q8TC71 538 aa25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 C10orf88Q9H8K7 445 aa25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 PCDH18Q9HCL0 1135 aa25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 TRMT13Q9NUP7 481 aaKnown RBP25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 NINJ2Q9NZG7 142 aa25.75■■□□□ 1.71
DNMT3A-206ENST00000406659 CASTOR2A6NHX0 329 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 EIF3HO15372 352 aaKnown RBP eCLIP25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 MDH1P40925 334 aaKnown RBP25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 CCDC142Q17RM4 750 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 PCGF5Q86SE9 256 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 RELL1Q8IUW5 271 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 CD99L2Q8TCZ2 262 aa25.74■■□□□ 1.71
DNMT3A-206ENST00000406659 EPS8L3Q8TE67 593 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms