RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CD300CQ08708 224 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 NKX1-1Q15270 411 aaPredicted RBP14.55□□□□□ -0.08
DUSP28-202ENST00000405954 EPHA7Q15375 998 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 GRIK5Q16478 980 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 CAVIN4Q5BKX8 364 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 AHI1Q8N157 1196 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 RIOK1Q9BRS2 568 aaKnown RBP14.55□□□□□ -0.08
DUSP28-202ENST00000405954 GCOM2Q9BZD3 368 aaPredicted RBP14.55□□□□□ -0.08
DUSP28-202ENST00000405954 RAB20Q9NX57 234 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 SNX13Q9Y5W8 968 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 RNF103-CHMP3A0A140T963 221 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 A0A1W2PPW3 197 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 SLC37A4O43826 429 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 DNAJA2O60884 412 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 MFN2O95140 757 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 BCL10O95999 233 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 KRT8P05787 483 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 ETS1P14921 441 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 PKNOX1P55347 436 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 SMAD1Q15797 465 aaKnown RBP14.55□□□□□ -0.08
DUSP28-202ENST00000405954 UBE2SQ16763 222 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 SPDYAQ5MJ70 313 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 DEPDC1Q5TB30 811 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 C11orf63Q6NUN7 778 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 C11orf74Q86VG3 221 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 ZNF34Q8IZ26 560 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 DCLK3Q9C098 648 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 GBA3Q9H227 469 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 SLC24A2Q9UI40 661 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 CDH22Q9UJ99 828 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 NOX1Q9Y5S8 564 aa14.55□□□□□ -0.08
DUSP28-202ENST00000405954 PIK3R2O00459 728 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 TSPAN9O75954 239 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 FGFR1P11362 822 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 TRPC1P48995 793 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 FMO5P49326 533 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 PGS1Q32NB8 556 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 ZNF829Q3KNS6 432 aaPredicted RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 SNRNP48Q6IEG0 339 aaKnown RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 GALNT18Q6P9A2 607 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 DENND1AQ8TEH3 1009 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 BHMTQ93088 406 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 POLR3CQ9BUI4 534 aaPredicted RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 EBF1Q9UH73 591 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 TRIM49D1C9J1S8 452 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 KRT37O76014 449 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 CAPN1P07384 714 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 SMIM18P0DKX4 95 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 BMP3P12645 472 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 ETFBP38117 255 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 NKX2-5P52952 324 aaPredicted RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 NME3Q13232 169 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 FAM98CQ17RN3 349 aaKnown RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 NIPAL1Q6NVV3 410 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 MYO1HQ8N1T3 1032 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 PSPC1Q8WXF1 523 aaKnown RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 PCDHA3Q9Y5H8 950 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 STRCP1A6NGW2 1772 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 NCANO14594 1321 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 TOGARAM1Q9Y4F4 1720 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 UNCXA6NJT0 531 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 DCXO43602 365 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 BUD23O43709 281 aaKnown RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 DDX5P17844 614 aaKnown RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 GCLMP48507 274 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 LRP8Q14114 963 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 CEP55Q53EZ4 464 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 PRR23CQ6ZRP0 262 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 STXBP4Q6ZWJ1 553 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 SLC35C1Q96A29 364 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 C12orf43Q96C57 262 aaKnown RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 TMA16Q96EY4 203 aaKnown RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 ZFYVE19Q96K21 471 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 HERC2P3Q9BVR0 1158 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 SENP6Q9GZR1 1112 aaPredicted RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 SRP68Q9UHB9 627 aaKnown RBP14.54□□□□□ -0.08
DUSP28-202ENST00000405954 EMSYQ7Z589 1322 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 KAT6AQ92794 2004 aa14.54□□□□□ -0.08
DUSP28-202ENST00000405954 STAT3P40763 770 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 TBCCQ15814 346 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 SETD3Q86TU7 594 aaPredicted RBP14.53□□□□□ -0.08
DUSP28-202ENST00000405954 CCDC33Q8N5R6 958 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 SHKBP1Q8TBC3 707 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 TGFBRAP1Q8WUH2 860 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 SNX25Q9H3E2 840 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 SIAEQ9HAT2 523 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 TRIM39Q9HCM9 518 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 RAB26Q9ULW5 256 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 PSMD13Q9UNM6 376 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 FRMPD2Q68DX3 1309 aaPredicted RBP14.53□□□□□ -0.08
DUSP28-202ENST00000405954 ATRNO75882 1429 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 ZNF839A8K0R7 811 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 FAM47E-STBD1D6RA91 191 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 CHMP2AO43633 222 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 GABBR2O75899 941 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 BAIAP3O94812 1187 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 MYO1DO94832 1006 aa14.53□□□□□ -0.08
DUSP28-202ENST00000405954 DLDP09622 509 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms