RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 PRKAA2P54646 552 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 STRA8Q7Z7C7 330 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 STK32AQ8WU08 396 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 ZNF184Q99676 751 aaPredicted RBP13.79□□□□□ -0.2
SNED1-205ENST00000405547 TMEM245Q9H330 911 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DUX4Q9UBX2 424 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 TUBGCP4Q9UGJ1 667 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 NCAM2O15394 837 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 PTPN7P35236 360 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 NR2C2P49116 596 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 TBL3Q12788 808 aaKnown RBP13.79□□□□□ -0.2
SNED1-205ENST00000405547 MRNIPQ6NTE8 343 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 TDRD5Q8NAT2 981 aaKnown RBP13.79□□□□□ -0.2
SNED1-205ENST00000405547 CHST13Q8NET6 341 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 B4GALNT2Q8NHY0 566 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 TRAPPC9Q96Q05 1148 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 SNX13Q9Y5W8 968 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 FGFR2P21802 821 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DCAF4L1Q3SXM0 396 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 PDPK2PQ6A1A2 396 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DEFB107AQ8IZN7 70 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DCLK3Q9C098 648 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 MYH7BA7E2Y1 1941 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 BGNP21810 368 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 ALDH5A1P51649 535 aaPredicted RBP13.79□□□□□ -0.2
SNED1-205ENST00000405547 FAXCQ5TGI0 409 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 CATSPER2Q96P56 530 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 MAGEB16A2A368 324 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 SUPT7LO94864 414 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 GH1P01241 217 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 SLC2A3P11169 496 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 CPA3P15088 417 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 SOX6P35712 828 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 R3HDM1Q15032 1099 aaKnown RBP13.79□□□□□ -0.2
SNED1-205ENST00000405547 KCNT1Q5JUK3 1230 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 TSEN2Q8NCE0 465 aaKnown RBP13.79□□□□□ -0.2
SNED1-205ENST00000405547 TCP10LQ8TDR4 215 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 OPTNQ96CV9 577 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 TUBGCP3Q96CW5 907 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 DPP3Q9NY33 737 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 POLIQ9UNA4 740 aa13.79□□□□□ -0.2
SNED1-205ENST00000405547 TFE3P19532 575 aaPredicted RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 IFI35P80217 286 aaPredicted RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 MAPRE1Q15691 268 aaKnown RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 ACBD5Q5T8D3 534 aaPredicted RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 SLFN11Q7Z7L1 901 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 GANCQ8TET4 914 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 FAM95CA0A1B0GW59 222 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 LRRC74AQ0VAA2 488 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 DENND5BQ6ZUT9 1274 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 MCOLN2Q8IZK6 566 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 TCF7L2Q9NQB0 619 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 LRRC4BQ9NT99 713 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 STARD13Q9Y3M8 1113 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 NAIF1Q69YI7 327 aaPredicted RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 TAS1R2Q8TE23 839 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 ZNF75CPQ92670 426 aaPredicted RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 THUMPD3Q9BV44 507 aaKnown RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 TWF1Q12792 350 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 ZBTB49Q6ZSB9 765 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 SV2AQ7L0J3 742 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 CCDC103Q8IW40 242 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 OTULINQ96BN8 352 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 NMD3Q96D46 503 aaKnown RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 APOPT1Q96IL0 206 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 AGBL1Q96MI9 1066 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 CISHQ9NSE2 258 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 DNALI1O14645 258 aaPredicted RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 FAM58BPP0C7Q3 252 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 ZNF23P17027 643 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 SLC1A6P48664 564 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 DRG2P55039 364 aaKnown RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 TMEM119Q4V9L6 283 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 IL31Q6EBC2 164 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 PMPCBO75439 489 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 SH3RF1Q7Z6J0 888 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 SLC22A9Q8IVM8 553 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 ABRAQ8N0Z2 381 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 CGRRF1Q99675 332 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 GPRC5CQ9NQ84 441 aa13.78□□□□□ -0.2
SNED1-205ENST00000405547 COPG1Q9Y678 874 aaKnown RBP13.78□□□□□ -0.2
SNED1-205ENST00000405547 F9P00740 461 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 RBP1P09455 135 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 BCAT1P54687 386 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 TIGD7Q6NT04 549 aaPredicted RBP13.77□□□□□ -0.2
SNED1-205ENST00000405547 SYBUQ9NX95 663 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 VTI1BQ9UEU0 232 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 DRG1Q9Y295 367 aaKnown RBP13.77□□□□□ -0.2
SNED1-205ENST00000405547 CNTNAP4Q9C0A0 1308 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 TPST1O60507 370 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 CACNB2Q08289 660 aaPredicted RBP13.77□□□□□ -0.2
SNED1-205ENST00000405547 MMRN1Q13201 1228 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 MPP3Q13368 585 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 PKN3Q6P5Z2 889 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 IYDQ6PHW0 289 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms