RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 NEU2Q9Y3R4 380 aa12.39□□□□□ -0.43
SMS-202ENST00000404933 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 GOLGA6L10A6NI86 522 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 FKTNO75072 461 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 GABBR2O75899 941 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 PAX3P23760 479 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 HNRNPH1P31943 449 aaKnown RBP12.38□□□□□ -0.43
SMS-202ENST00000404933 ADCY8P40145 1251 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 PMS2P54278 862 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 SLMAPQ14BN4 828 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 UPP1Q16831 310 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 C15orf59Q2T9L4 293 aaPredicted RBP12.38□□□□□ -0.43
SMS-202ENST00000404933 BOLA3Q53S33 107 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 LHX8Q68G74 356 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 BBS12Q6ZW61 710 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 HSPH1Q92598 858 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.438e-6■■■□□ 18.5
SMS-202ENST00000404933 NKD2Q969F2 451 aaPredicted RBP12.38□□□□□ -0.43
SMS-202ENST00000404933 CABS1Q96KC9 395 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 ATP6V1G3Q96LB4 118 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 FAM118BQ9BPY3 351 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
SMS-202ENST00000404933 DNPEPQ9ULA0 475 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 ZNF148Q9UQR1 794 aa12.38□□□□□ -0.43
SMS-202ENST00000404933 H0YGN5 161 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 ATP2C2O75185 946 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 KRT14P02533 472 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 CKBP12277 381 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 LCP1P13796 627 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 IVDP26440 423 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 LSP1P33241 339 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 PTPN9P43378 593 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 VCPP55072 806 aaKnown RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 PLCB3Q01970 1234 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 GRIK3Q13003 919 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 TAF5Q15542 800 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 CDO1Q16878 200 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 EFHC1Q5JVL4 640 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 MAP7D3Q8IWC1 876 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 FUKQ8N0W3 1084 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 SLC43A3Q8NBI5 491 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 SPATA18Q8TC71 538 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 TEKT4Q8WW24 435 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 ARL8AQ96BM9 186 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 CFAP57Q96MR6 1250 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 UROC1Q96N76 676 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 PEBP4Q96S96 227 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 TBCBQ99426 244 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 B3GNT5Q9BYG0 378 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 PABPC3Q9H361 631 aaKnown RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 ACTR5Q9H9F9 607 aaPredicted RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 CACNG4Q9UBN1 327 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 NFS1Q9Y697 457 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 CASTOR2A6NHX0 329 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 CST8O60676 142 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 FAM107AO95990 144 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 ITGAVP06756 1048 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 ODC1P11926 461 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 NPR3P17342 541 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 ACAT1P24752 427 aaKnown RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 GRK4P32298 578 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 MDH1P40925 334 aaKnown RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 VEGFBP49765 207 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 LIG3P49916 1009 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 EIF3BP55884 814 aaKnown RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 ATP11AP98196 1134 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 TRIP13Q15645 432 aaPredicted RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 MDH1BQ5I0G3 518 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 SH3PXD2AQ5TCZ1 1133 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 ECHDC2Q86YB7 292 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 RFX6Q8HWS3 928 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 ALLCQ8N6M5 410 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 FAM172AQ8WUF8 416 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 SYT15Q9BQS2 421 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 MED10Q9BTT4 135 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 MAK16Q9BXY0 300 aaKnown RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 TRPV6Q9H1D0 765 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
SMS-202ENST00000404933 STARD7Q9NQZ5 370 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMS-202ENST00000404933 ANAPC5Q9UJX4 755 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 CDH9Q9ULB4 789 aa12.37□□□□□ -0.43
SMS-202ENST00000404933 CENPFP49454 3210 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 NDC80O14777 642 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 ENDOD1O94919 500 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 POMCP01189 267 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 CD48P09326 243 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 MYZAPP0CAP1 466 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 FAM200BP0CF97 657 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 RARGP13631 454 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 NR1D1P20393 614 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 IGFBP6P24592 240 aaPredicted RBP12.36□□□□□ -0.43
SMS-202ENST00000404933 KLRC2P26717 231 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 PCSK1P29120 753 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 CDH6P55285 790 aa12.36□□□□□ -0.43
SMS-202ENST00000404933 TUSC3Q13454 348 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms