RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 BZW2Q9Y6E2 419 aaKnown RBP30.91■■■□□ 2.54
USP42-202ENST00000404008 CYP1A1P04798 512 aaPredicted RBP30.9■■■□□ 2.54
USP42-202ENST00000404008 SERPING1P05155 500 aa30.9■■■□□ 2.54
USP42-202ENST00000404008 KCNQ1P51787 676 aa30.9■■■□□ 2.54
USP42-202ENST00000404008 NOMO3P69849 1222 aa30.9■■■□□ 2.54
USP42-202ENST00000404008 ZNF571Q7Z3V5 609 aaPredicted RBP30.9■■■□□ 2.54
USP42-202ENST00000404008 ATXN2LQ8WWM7 1075 aaKnown RBP30.9■■■□□ 2.54
USP42-202ENST00000404008 OVCA2Q8WZ82 227 aa30.9■■■□□ 2.54
USP42-202ENST00000404008 NOX5Q96PH1 765 aa30.9■■■□□ 2.54
USP42-202ENST00000404008 GCNAQ96QF7 691 aa30.9■■■□□ 2.54
USP42-202ENST00000404008 PCDHB18PQ96TA0 734 aa30.9■■■□□ 2.54
USP42-202ENST00000404008 ST7Q9NRC1 585 aa30.9■■■□□ 2.54
USP42-202ENST00000404008 NCANO14594 1321 aa30.89■■■□□ 2.54
USP42-202ENST00000404008 GJA1P17302 382 aa30.89■■■□□ 2.54
USP42-202ENST00000404008 CEBPBP17676 345 aa30.89■■■□□ 2.54
USP42-202ENST00000404008 WDR59Q6PJI9 974 aa30.89■■■□□ 2.54
USP42-202ENST00000404008 GET4Q7L5D6 327 aaPredicted RBP30.89■■■□□ 2.54
USP42-202ENST00000404008 CCDC186Q7Z3E2 898 aa30.89■■■□□ 2.54
USP42-202ENST00000404008 DRC7Q8IY82 874 aa30.89■■■□□ 2.54
USP42-202ENST00000404008 SIX6OS1Q8N1H7 587 aa30.89■■■□□ 2.54
USP42-202ENST00000404008 ATXN3LQ9H3M9 355 aa30.89■■■□□ 2.54
USP42-202ENST00000404008 DOCK8Q8NF50 2099 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 PIK3R2O00459 728 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 USP17L7P0C7H9 530 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 LCP1P13796 627 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 IL9P15248 144 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 ACADSBP45954 432 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 PPP3CCP48454 512 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 MRPS5P82675 430 aaKnown RBP30.88■■■□□ 2.53
USP42-202ENST00000404008 PM20D1Q6GTS8 502 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 TMEM110Q86TL2 294 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 TC2NQ8N9U0 490 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 PDZD8Q8NEN9 1154 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 ING5Q8WYH8 240 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 PPP1R13BQ96KQ4 1090 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 CPXM1Q96SM3 734 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 ULBP1Q9BZM6 244 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 GMIPQ9P107 970 aa30.88■■■□□ 2.53
USP42-202ENST00000404008 ZBED1O96006 694 aa30.87■■■□□ 2.53
USP42-202ENST00000404008 TEAD2Q15562 447 aa30.87■■■□□ 2.53
USP42-202ENST00000404008 TDRD12Q587J7 1177 aaKnown RBP30.87■■■□□ 2.53
USP42-202ENST00000404008 NAA35Q5VZE5 725 aa30.87■■■□□ 2.53
USP42-202ENST00000404008 SCML4Q8N228 414 aa30.87■■■□□ 2.53
USP42-202ENST00000404008 PHF7Q9BWX1 381 aaPredicted RBP30.87■■■□□ 2.53
USP42-202ENST00000404008 CNGB3Q9NQW8 809 aa30.87■■■□□ 2.53
USP42-202ENST00000404008 SEPT11Q9NVA2 429 aaKnown RBP30.87■■■□□ 2.53
USP42-202ENST00000404008 TRPM5Q9NZQ8 1165 aa30.87■■■□□ 2.53
USP42-202ENST00000404008 E5RJQ4 531 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 ZDHHC11BP0C7U3 371 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 UNGP13051 313 aaPredicted RBP30.86■■■□□ 2.53
USP42-202ENST00000404008 TNFAIP3P21580 790 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 MRE11P49959 708 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 CYP4F8P98187 520 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 CLEC16AQ2KHT3 1053 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 TSR1Q2NL82 804 aaKnown RBP30.86■■■□□ 2.53
USP42-202ENST00000404008 PTPN20Q4JDL3 420 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 NPAS3Q8IXF0 933 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 CPA5Q8WXQ8 436 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 FGF13Q92913 245 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 ZNHIT6Q9NWK9 470 aaKnown RBP30.86■■■□□ 2.53
USP42-202ENST00000404008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP30.86■■■□□ 2.53
USP42-202ENST00000404008 ARHGAP20Q9P2F6 1191 aa30.86■■■□□ 2.53
USP42-202ENST00000404008 CHORDC1Q9UHD1 332 aaPredicted RBP30.86■■■□□ 2.53
USP42-202ENST00000404008 NUP210Q8TEM1 1887 aaPredicted RBP30.85■■■□□ 2.53
USP42-202ENST00000404008 ZNF840PA6NDX5 716 aa30.85■■■□□ 2.53
USP42-202ENST00000404008 PLEKP08567 350 aaPredicted RBP30.85■■■□□ 2.53
USP42-202ENST00000404008 GSE1Q14687 1217 aa30.85■■■□□ 2.53
USP42-202ENST00000404008 SNX30Q5VWJ9 437 aa30.85■■■□□ 2.53
USP42-202ENST00000404008 BHLHA9Q7RTU4 235 aa30.85■■■□□ 2.53
USP42-202ENST00000404008 MRPS31Q92665 395 aaKnown RBP30.85■■■□□ 2.53
USP42-202ENST00000404008 IMPACTQ9P2X3 320 aa30.85■■■□□ 2.53
USP42-202ENST00000404008 TJP2Q9UDY2 1190 aa30.85■■■□□ 2.53
USP42-202ENST00000404008 FBXO21O94952 628 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 PGFP49763 221 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 DAOAP59103 153 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 CENPCQ03188 943 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 ARHGAP15Q53QZ3 475 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 STXBP5Q5T5C0 1151 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 POTEHQ6S545 545 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 MON1AQ86VX9 555 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 SCUBE3Q8IX30 993 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 SPC24Q8NBT2 197 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 ASB2Q96Q27 587 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 MYADMQ96S97 322 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 MIS12Q9H081 205 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 TLR8Q9NR97 1041 aaKnown RBP30.84■■■□□ 2.53
USP42-202ENST00000404008 CDH7Q9ULB5 785 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 USTQ9Y2C2 406 aa30.84■■■□□ 2.53
USP42-202ENST00000404008 FAM170AA1A519 330 aa30.83■■■□□ 2.53
USP42-202ENST00000404008 ERBB2P04626 1255 aa30.83■■■□□ 2.53
USP42-202ENST00000404008 OTOP3Q7RTS5 596 aa30.83■■■□□ 2.53
USP42-202ENST00000404008 SCD5Q86SK9 330 aa30.83■■■□□ 2.53
USP42-202ENST00000404008 ERICH1Q86X53 443 aa30.83■■■□□ 2.53
USP42-202ENST00000404008 IPO4Q8TEX9 1081 aaKnown RBP30.83■■■□□ 2.53
USP42-202ENST00000404008 CLEC4CQ8WTT0 213 aa30.83■■■□□ 2.53
USP42-202ENST00000404008 NDRG1Q92597 394 aaKnown RBP30.83■■■□□ 2.53
USP42-202ENST00000404008 NMUR1Q9HB89 426 aa30.83■■■□□ 2.53
USP42-202ENST00000404008 GDE1Q9NZC3 331 aa30.83■■■□□ 2.53
USP42-202ENST00000404008 DDX3XO00571 662 aaKnown RBP eCLIP30.82■■■□□ 2.529e-7■■■□□ 18.6
USP42-202ENST00000404008 PAPSS1O43252 624 aaPredicted RBP30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms