RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZAR1LA6NP61 321 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 CCNT2O60583 730 aaKnown RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 PPP6R2O75170 966 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 WDHD1O75717 1129 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 ACTL6BO94805 426 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 FESP07332 822 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 ANXA6P08133 673 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 CHRM2P08172 466 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 ITGAMP11215 1152 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 LAG3P18627 525 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 CNTFP26441 200 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 HTR7P34969 479 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 LIPAP38571 399 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 GATMP50440 423 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 BCAT1P54687 386 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 ALDH18A1P54886 795 aaKnown RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 CTSWP56202 376 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 CUL4BQ13620 913 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 P3H1Q32P28 736 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 SP5Q6BEB4 398 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 LVRNQ6Q4G3 990 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 FSTL5Q8N475 847 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 OSBPL9Q96SU4 736 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 MLST8Q9BVC4 326 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 PABPC3Q9H361 631 aaKnown RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 NRDE2Q9H7Z3 1164 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 SEPSECSQ9HD40 501 aaKnown RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 TMEM74BQ9NUR3 256 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 TMOD4Q9NZQ9 345 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 DKK2Q9UBU2 259 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 TESQ9UGI8 421 aaKnown RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 GTF2A1LQ9UNN4 478 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 DRG1Q9Y295 367 aaKnown RBP4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 A1L4Q6 167 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 RRN3P2A6NIE6 340 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 EXOC5O00471 708 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 TAF5LO75529 589 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 VIPP01282 170 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 ITGA2BP08514 1039 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 CKMT1AP12532 417 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 RBL1P28749 1068 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 PBX1P40424 430 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 CCT5P48643 541 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 GUCY1B3Q02153 619 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 FOXO1Q12778 655 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 ATP1A4Q13733 1029 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 TBCCQ15814 346 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 TIGD2Q4W5G0 525 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 PRR16Q569H4 304 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 TREML2Q5T2D2 321 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 SFRP4Q6FHJ7 346 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 RINT1Q6NUQ1 792 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 TMED8Q6PL24 325 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 CAND1Q86VP6 1230 aaKnown RBP4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 CCDC117Q8IWD4 279 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 PAF1Q8N7H5 531 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 SUPT20HQ8NEM7 779 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 OTUD7AQ8TE49 926 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 XAGE5Q8WWM1 108 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 EID2BQ96D98 161 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 UBXN10Q96LJ8 280 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 RTKNQ9BST9 563 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 GLOD4Q9HC38 313 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 TMEM8AQ9HCN3 771 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 CASS4Q9NQ75 786 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 PARPBPQ9NWS1 579 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 GGA3Q9NZ52 723 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 HERC5Q9UII4 1024 aaKnown RBP4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 FEM1BQ9UK73 627 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 USP22Q9UPT9 525 aa4.51□□□□□ -1.69
HMGB1P17-201ENST00000403495 ADGRA2Q96PE1 1338 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 PNMA6EA0A0J9YXQ4 647 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 TMEM200CA6NKL6 621 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 KIF28PB7ZC32 967 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 TISP43B9A030 160 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 FOXD2O60548 495 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 SNX2O60749 519 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 RPP40O75818 363 aaKnown RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 NTSR2O95665 410 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 CER1O95813 267 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 POLBP06746 335 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 ZNF20P17024 532 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 EPHA3P29320 983 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 SLC5A2P31639 672 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 MTHFSP49914 203 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 ATXN1P54253 815 aaKnown RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 TIAL1Q01085 375 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 TANGO2Q6ICL3 276 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 MZT2AQ6P582 158 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 CYP26C1Q6V0L0 522 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 RNF207Q6ZRF8 634 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 SLC44A2Q8IWA5 706 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 FTSJ3Q8IY81 847 aaKnown RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 CLASRPQ8N2M8 674 aaKnown RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 MBD3L2Q8NHZ7 208 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 SUN3Q8TAQ9 357 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 CXorf38Q8TB03 319 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 ABHD5Q8WTS1 349 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 AFG1LQ8WV93 481 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 TFAP2BQ92481 460 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms