RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 DCAF17Q5H9S7 520 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 LCE2CQ5TA81 110 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 TRIM68Q6AZZ1 485 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 KLHL10Q6JEL2 608 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 TXNDC11Q6PKC3 985 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 VSTM1Q6UX27 236 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 DENND5BQ6ZUT9 1274 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 PAQR9Q6ZVX9 377 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 FAM35AQ86V20 835 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 MON1AQ86VX9 555 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 ADSSL1Q8N142 457 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 CELF5Q8N6W0 485 aaKnown RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 ARL14EPQ8N8R7 260 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 C12orf29Q8N999 325 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 BPIFB1Q8TDL5 484 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 CSGALNACT1Q8TDX6 532 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 FAM3CQ92520 227 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 JAKMIP2Q96AA8 810 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 E2F7Q96AV8 911 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 TRMT2BQ96GJ1 504 aaKnown RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 SPATA17Q96L03 361 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 MYRFLQ96LU7 910 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 KCNK16Q96T55 309 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 TSG101Q99816 390 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 BCO2Q9BYV7 579 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 GKN1Q9NS71 199 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 KRT82Q9NSB4 513 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 RBM12Q9NTZ6 932 aaKnown RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 SPATA6Q9NWH7 488 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 CHMP5Q9NZZ3 219 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 UXTQ9UBK9 157 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 USP34Q70CQ2 3546 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 SDK1Q7Z5N4 2213 aa6.13□□□□□ -1.43
HMGB1P20-201ENST00000402555 FRYLO94915 3013 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TRAV19A0A0A6YYK7 116 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 OTOL1A6NHN0 477 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 SPECC1L-ADORA2AF8WAN1 911 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TERTO14746 1132 aaKnown RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 CAPN5O15484 640 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 AP1G2O75843 785 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 BEST1O76090 585 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 ABL1P00519 1130 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 CKMP06732 381 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 P4HA1P13674 534 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 PRKCSHP14314 528 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 DDX6P26196 483 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 WEE1P30291 646 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 MXI1P50539 228 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 STX17P56962 302 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 LRMPQ12912 555 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TAF10Q12962 218 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 MORC3Q14149 939 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 CAMK4Q16566 473 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TUSC1Q2TAM9 212 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 CBWD6Q4V339 395 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 ARHGAP29Q52LW3 1261 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZNF394Q53GI3 561 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 COBLL1Q53SF7 1204 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 WDR44Q5JSH3 913 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 CBWD3Q5JTY5 395 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 CBWD5Q5RIA9 395 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TCERG1LQ5VWI1 586 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 NAIF1Q69YI7 327 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 KRT39Q6A163 491 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TSSK4Q6SA08 328 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZNF852Q6ZMS4 543 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TRIM46Q7Z4K8 759 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 C1orf210Q8IVY1 113 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZC3H3Q8IXZ2 948 aaKnown RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 MAML2Q8IZL2 1156 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 FUKQ8N0W3 1084 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 ZMIZ2Q8NF64 920 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 PATJQ8NI35 1801 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 SCAMP5Q8TAC9 235 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 SLC2A14Q8TDB8 520 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 SH3RF2Q8TEC5 729 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 WHAMMQ8TF30 809 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 NELFBQ8WX92 580 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TAF4BQ92750 862 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TNIP3Q96KP6 325 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 C8orf48Q96LL4 319 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 SMOQ99835 787 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 ARID3AQ99856 593 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 DUSP9Q99956 384 aaKnown RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TTLL2Q9BWV7 592 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 ELOVL4Q9GZR5 314 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 NIF3L1Q9GZT8 377 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 EBF3Q9H4W6 596 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 LMAN1LQ9HAT1 526 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TMEM8AQ9HCN3 771 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TRPV5Q9NQA5 729 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 HPS4Q9NQG7 708 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TDP1Q9NUW8 608 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 OBP2AQ9NY56 170 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 TRPM5Q9NZQ8 1165 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 GCNT4Q9P109 453 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 HOOK1Q9UJC3 728 aaKnown RBP6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 CTNND2Q9UQB3 1225 aa6.12□□□□□ -1.43
HMGB1P20-201ENST00000402555 WNT6Q9Y6F9 365 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms