RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 KCTD16Q68DU8 428 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 KDM7AQ6ZMT4 941 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 GLIS1Q8NBF1 620 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 SLC43A3Q8NBI5 491 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 C3orf58Q8NDZ4 430 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 SPATA18Q8TC71 538 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 CLEC4CQ8WTT0 213 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 FAM172AQ8WUF8 416 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 KCTD13Q8WZ19 329 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 HSPH1Q92598 858 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 DDX23Q9BUQ8 820 aaKnown RBP12.83□□□□□ -0.36
CLIP4-203ENST00000401617 LRRC4CQ9HCJ2 640 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 DNALI1O14645 258 aaPredicted RBP12.83□□□□□ -0.36
CLIP4-203ENST00000401617 SKIP12755 728 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 NPR3P17342 541 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 IL4RP24394 825 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 CHKAP35790 457 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 UBAP2Q5T6F2 1119 aaKnown RBP12.83□□□□□ -0.36
CLIP4-203ENST00000401617 IZUMO3Q5VZ72 239 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 TRAF7Q6Q0C0 670 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 GSTA5Q7RTV2 222 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
CLIP4-203ENST00000401617 PIGZQ86VD9 579 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 PCDH9Q9HC56 1237 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 CRTAC1Q9NQ79 661 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 CACNG4Q9UBN1 327 aa12.83□□□□□ -0.36
CLIP4-203ENST00000401617 TRPA1O75762 1119 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
CLIP4-203ENST00000401617 SHBGP04278 402 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 PAX3P23760 479 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 CDH6P55285 790 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 ATP11AP98196 1134 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 ADCY1Q08828 1119 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 CCDC142Q17RM4 750 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 EFHC1Q5JVL4 640 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 LHX8Q68G74 356 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 CD300LGQ6UXG3 332 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 ZNF771Q7L3S4 317 aaPredicted RBP12.82□□□□□ -0.36
CLIP4-203ENST00000401617 PRUNE1Q86TP1 453 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 RFX6Q8HWS3 928 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 TLCD1Q96CP7 247 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 HAUS1Q96CS2 278 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 FAF2Q96CS3 445 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 PGBD4Q96DM1 585 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 RNF157Q96PX1 679 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 ADAM2Q99965 735 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 CDC42EP4Q9H3Q1 356 aaKnown RBP12.82□□□□□ -0.36
CLIP4-203ENST00000401617 UBN1Q9NPG3 1134 aa12.82□□□□□ -0.36
CLIP4-203ENST00000401617 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLIP4-203ENST00000401617 A6NNZ2 444 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 CLDN5O00501 218 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 LCP1P13796 627 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 NR1D1P20393 614 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 ACAT1P24752 427 aaKnown RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 VPS41P49754 854 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 TFDP2Q14188 446 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 CDO1Q16878 200 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 P3H1Q32P28 736 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 TUBB8Q3ZCM7 444 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 CROCCP2Q86T23 111 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 MAP7D3Q8IWC1 876 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 ZCCHC9Q8N567 271 aaKnown RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 RAET1EQ8TD07 263 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 TMEM121Q9BTD3 319 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 DDX43Q9NXZ2 648 aaKnown RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 SAE1Q9UBE0 346 aaPredicted RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 PTPRDP23468 1912 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 NDC80O14777 642 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 BEST1O76090 585 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 CYP11A1P05108 521 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 ZSCAN5DPP0CG00 497 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 ETS1P14921 441 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 PECAM1P16284 738 aaPredicted RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 CAPN2P17655 700 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 DESP17661 470 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 TFE3P19532 575 aaPredicted RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 DYNLT1P63172 113 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 GRIK3Q13003 919 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 KRT71Q3SY84 523 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 TIGD5Q53EQ6 642 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 MDH1BQ5I0G3 518 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 CLEC20AQ6ZU45 233 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 STRADAQ7RTN6 431 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 BNIPLQ7Z465 357 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 HOOK3Q86VS8 718 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 ECHDC2Q86YB7 292 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 NT5C3BQ969T7 300 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 PGM2Q96G03 612 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 SYT15Q9BQS2 421 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 PAAF1Q9BRP4 392 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 SNRNP25Q9BV90 132 aaKnown RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 CALN1Q9BXU9 219 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 PCDH18Q9HCL0 1135 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 CDH9Q9ULB4 789 aa12.81□□□□□ -0.36
CLIP4-203ENST00000401617 TPX2Q9ULW0 747 aaKnown RBP12.81□□□□□ -0.36
CLIP4-203ENST00000401617 HTTP42858 3142 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms