RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 KCNK16Q96T55 309 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 LRRC4Q9HBW1 653 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 FAM53CQ9NYF3 392 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 KDELR1P24390 212 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 PTPN9P43378 593 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 NDUFV1P49821 464 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 CASP8Q14790 479 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 TAZQ16635 292 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 ODF2Q5BJF6 829 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 KAZNQ674X7 775 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 DEFB128Q7Z7B8 93 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 THEM5Q8N1Q8 247 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 EIF1ADQ8N9N8 165 aaKnown RBP26.84■■□□□ 1.89
CPNE1-205ENST00000401607 CMASQ8NFW8 434 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-205ENST00000401607 FAM172AQ8WUF8 416 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 ADAM33Q9BZ11 813 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 RAB17Q9H0T7 212 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 CSNK1G1Q9HCP0 422 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 NGRNQ9NPE2 291 aaKnown RBP26.84■■□□□ 1.89
CPNE1-205ENST00000401607 ATP11BQ9Y2G3 1177 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 UTP11Q9Y3A2 253 aaKnown RBP26.84■■□□□ 1.89
CPNE1-205ENST00000401607 HHLA1C9JL84 531 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 DAPK3O43293 454 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 TFE3P19532 575 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-205ENST00000401607 GJA8P48165 433 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 MRPS5P82675 430 aaKnown RBP26.84■■□□□ 1.89
CPNE1-205ENST00000401607 YWHAHQ04917 246 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-205ENST00000401607 CUL1Q13616 776 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 EFHC1Q5JVL4 640 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 DUPD1Q68J44 220 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 EMBQ6PCB8 327 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 GPRIN1Q7Z2K8 1008 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 NPAS4Q8IUM7 802 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 CCDC105Q8IYK2 499 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 ERP44Q9BS26 406 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 HCSTQ9UBK5 93 aa26.84■■□□□ 1.89
CPNE1-205ENST00000401607 TKTL1P51854 596 aa26.83■■□□□ 1.89
CPNE1-205ENST00000401607 SNX1Q13596 522 aa26.83■■□□□ 1.89
CPNE1-205ENST00000401607 RAB41Q5JT25 222 aa26.83■■□□□ 1.89
CPNE1-205ENST00000401607 HSPH1Q92598 858 aa26.83■■□□□ 1.89
CPNE1-205ENST00000401607 SLCO2A1Q92959 643 aa26.83■■□□□ 1.89
CPNE1-205ENST00000401607 DDX23Q9BUQ8 820 aaKnown RBP26.83■■□□□ 1.89
CPNE1-205ENST00000401607 DPH5Q9H2P9 285 aa26.83■■□□□ 1.89
CPNE1-205ENST00000401607 NLRC5Q86WI3 1866 aa26.83■■□□□ 1.88
CPNE1-205ENST00000401607 NRP1O14786 923 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 TJP3O95049 919 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 CD48P09326 243 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 TNNT3P45378 269 aaPredicted RBP26.82■■□□□ 1.88
CPNE1-205ENST00000401607 HDAC4P56524 1084 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 C1QTNF8P60827 252 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 CCNG2Q16589 344 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 SND1Q7KZF4 910 aaKnown RBP eCLIP26.82■■□□□ 1.88
CPNE1-205ENST00000401607 SIX6OS1Q8N1H7 587 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 CENPIQ92674 756 aaPredicted RBP26.82■■□□□ 1.88
CPNE1-205ENST00000401607 CAVIN3Q969G5 261 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 VWCEQ96DN2 955 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 UBXN6Q9BZV1 441 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 NEUROG2Q9H2A3 272 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 RASAL2Q9UJF2 1139 aa26.82■■□□□ 1.88
CPNE1-205ENST00000401607 HOXA2O43364 376 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 PRPSAP2O60256 369 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 HSF2BPO75031 334 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 FAM153BP0C7A2 387 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 FAM153CQ494X1 144 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 FAM118BQ9BPY3 351 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 ULBP1Q9BZM6 244 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 TRIM31Q9BZY9 425 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 HOMER3Q9NSC5 361 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.81■■□□□ 1.88
CPNE1-205ENST00000401607 FAM153AQ9UHL3 310 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 EFR3BQ9Y2G0 817 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 TADA2AO75478 443 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 DAB1O75553 588 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 OAZ2O95190 189 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 BDNFP23560 247 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 ARSEP51690 589 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 TSPY1Q01534 308 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 DEFB106AQ8N104 65 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 ANKLE1Q8NAG6 615 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 FAM114A2Q9NRY5 505 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 MARCH5Q9NX47 278 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 MICAL3Q7RTP6 2002 aa26.81■■□□□ 1.88
CPNE1-205ENST00000401607 PTPRDP23468 1912 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 TRAPPC3O43617 180 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 ENDOD1O94919 500 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 MATKP42679 507 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 SLC11A1P49279 550 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 BCAR1P56945 870 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 MAPRE1Q15691 268 aaKnown RBP26.8■■□□□ 1.88
CPNE1-205ENST00000401607 KCTD6Q8NC69 237 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.8■■□□□ 1.883e-13■■■■■ 108.9
CPNE1-205ENST00000401607 FAM149B1Q96BN6 582 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 NCAPGQ9BPX3 1015 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 TMEM39AQ9NV64 488 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 ADAM28Q9UKQ2 775 aa26.8■■□□□ 1.88
CPNE1-205ENST00000401607 FBXO21O94952 628 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 ECEL1O95672 775 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 DAOAP59103 153 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 HLTFQ14527 1009 aaKnown RBP eCLIP26.79■■□□□ 1.885e-8■■□□□ 14.2
CPNE1-205ENST00000401607 SCYL2Q6P3W7 929 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms