RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 CYP4A22Q5TCH4 519 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 PLA2G4FQ68DD2 849 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 ARHGAP22Q7Z5H3 698 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 KIF12Q96FN5 646 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 ZNF70Q9UC06 446 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 AGAP1Q9UPQ3 857 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 UBR1Q8IWV7 1749 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 VIRMAQ69YN4 1812 aaKnown RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 CACNA1FO60840 1977 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 ASB14A6NK59 587 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 F8W810 466 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 SMNDC1O75940 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 KCNK10P57789 538 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 R3HDM1Q15032 1099 aaKnown RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 XKR3Q5GH77 459 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 AGAP11Q8TF27 550 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 FAM162AQ96A26 154 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 PAFAH2Q99487 392 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 BRD8Q9H0E9 1235 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 RPAP3Q9H6T3 665 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 AGPAT3Q9NRZ7 376 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 FAM200BP0CF97 657 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 MLNP12872 115 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 MUTP22033 750 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 GTF2H1P32780 548 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 SREBF1P36956 1147 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 PLEKHA7Q6IQ23 1121 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 CCDC103Q8IW40 242 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 KIAA0895Q8NCT3 520 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 DUSP9Q99956 384 aaKnown RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 BBS2Q9BXC9 721 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 KLHL4Q9C0H6 718 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 RSAD1Q9HA92 442 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 JPH1Q9HDC5 661 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 UTP6Q9NYH9 597 aaKnown RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 DNAJC16Q9Y2G8 782 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 DYRK3O43781 588 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 DLGAP3O95886 979 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 POLBP06746 335 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 PSMA4P25789 261 aaKnown RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 SLC34A1Q06495 639 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 NFIAQ12857 509 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 CNTN1Q12860 1018 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 GIT2Q14161 759 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 KCNT1Q5JUK3 1230 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 ACAD10Q6JQN1 1059 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 C11orf63Q6NUN7 778 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 C1orf131Q8NDD1 294 aaKnown RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 SPIRE2Q8WWL2 714 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 TRIM63Q969Q1 353 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 FAM163AQ96GL9 167 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 MPP4Q96JB8 637 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 ZDHHC15Q96MV8 337 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 ILKAPQ9H0C8 392 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-202ENST00000400053 TMEM8AQ9HCN3 771 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 WHRNQ9P202 907 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 ZNRF3Q9ULT6 936 aa9.17□□□□□ -0.94
PTPRM-202ENST00000400053 SERPIND1P05546 499 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 JAK1P23458 1154 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 STX5Q13190 355 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 NDUFA5Q16718 116 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 PREPLQ4J6C6 727 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 EFHC1Q5JVL4 640 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 SLC5A5Q92911 643 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 IL1RAPL1Q9NZN1 696 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 CTNNAL1Q9UBT7 734 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 SNX9Q9Y5X1 595 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 E9PBE3 544 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 OPLAHO14841 1288 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 RIPK2O43353 540 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 KLHL41O60662 606 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 H2AFYO75367 372 aaKnown RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 MYBL2P10244 700 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 SOX6P35712 828 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 PTENP60484 403 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 PLIN5Q00G26 463 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 TBL3Q12788 808 aaKnown RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 BAATQ14032 418 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 ARHGAP17Q68EM7 881 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 SDE2Q6IQ49 451 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 CCDC60Q8IWA6 550 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 MTERF3Q96E29 417 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 FAR2Q96K12 515 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 DCUN1D5Q9BTE7 237 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 ZMYND8Q9ULU4 1186 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 CACNB2Q08289 660 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 KIZQ2M2Z5 673 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 TRMT5Q32P41 509 aaKnown RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 UGT3A1Q6NUS8 523 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 KRT77Q7Z794 578 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 STK32AQ8WU08 396 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 TMEM121Q9BTD3 319 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 STN1Q9H668 368 aaKnown RBP9.16□□□□□ -0.94
PTPRM-202ENST00000400053 ARMCX1Q9P291 453 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 TAGLN3Q9UI15 199 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 TRPC5OSA6NMA1 111 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 CYTH3O43739 400 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 NR3C2P08235 984 aa9.16□□□□□ -0.94
PTPRM-202ENST00000400053 THRAP10827 490 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms