RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 RBP5P82980 135 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 SCAIQ8N9R8 606 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 RHBGQ9H310 441 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 PSTPIP1O43586 416 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 KCNH1O95259 989 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 TBXAS1P24557 533 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 PSMB9P28065 219 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 OLFML1Q6UWY5 402 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 MIEF2Q96C03 454 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ATXN3LQ9H3M9 355 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 COPG2Q9UBF2 871 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 VAV1P15498 845 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 CDC25AP30304 524 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 HNRNPH2P55795 449 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 KLHL38Q2WGJ6 581 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF746Q6NUN9 644 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 GPR141Q7Z602 305 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 SAMD3Q8N6K7 520 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 RASSF5Q8WWW0 418 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 PBKQ96KB5 322 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 AP1S3Q96PC3 154 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 FAM192AQ9GZU8 254 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 ALDH8A1Q9H2A2 487 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 TRPM5Q9NZQ8 1165 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 COMMD9Q9P000 198 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 BLOC1S6Q9UL45 172 aa11.5□□□□□ -0.57
CACNA1C-217ENST00000399641 SPATA31A1Q5TZJ5 1347 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 TTC34A8MYJ7 566 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 EXTL3O43909 919 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF806P0C7X5 589 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 KCNH2Q12809 1159 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 USP10Q14694 798 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 FNDC3BQ53EP0 1204 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 KIF2BQ8N4N8 673 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 FAM118BQ9BPY3 351 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 AASDHPPTQ9NRN7 309 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 ADAM22Q9P0K1 906 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 GPN3Q9UHW5 284 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 GGA2Q9UJY4 613 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 AGO2Q9UKV8 859 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 UNC13AQ9UPW8 1703 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 ZBTB7BO15156 539 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 EIF3DO15371 548 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 MYBPC1Q00872 1141 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 NFYCQ13952 458 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 FAM102AQ5T9C2 384 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 KBTBD7Q8WVZ9 684 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 TMEM143Q96AN5 459 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 MNTQ99583 582 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 LXNQ9BS40 222 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 COPS4Q9BT78 406 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 PARD6BQ9BYG5 372 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 PUS7LQ9H0K6 701 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 SHANK2Q9UPX8 1470 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 PSMD9O00233 223 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 UBA1P22314 1058 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 CYP2C19P33261 490 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 HNMTP50135 292 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 FAM171BQ6P995 826 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 ADGRF4Q8IZF3 695 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 RNPC3Q96LT9 517 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 CTTNBP2Q8WZ74 1663 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 CENPXA8MT69 81 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 SCAMP1O15126 338 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 SH3BGRLO75368 114 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 PTPN12Q05209 780 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 DMTNQ08495 405 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 TRIP10Q15642 601 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 HMBOX1Q6NT76 420 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 PRR23BQ6ZRT6 265 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 FAM151AQ8WW52 585 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 MED8Q96G25 268 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 C12orf4Q9NQ89 552 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 CLEC4AQ9UMR7 237 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 TCP11X1B4DZS4 312 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 SERPINB5P36952 375 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 TRAF2Q12933 501 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 ABRQ12979 859 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 GRB14Q14449 540 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 CCDC33Q8N5R6 958 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 GMCL1Q96IK5 515 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 EXOC2Q96KP1 924 aa11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 PIH1D3Q9NQM4 214 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-217ENST00000399641 CALB1P05937 261 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 TFE3P19532 575 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 MADCAM1Q13477 382 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 DAB2IPQ5VWQ8 1189 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 PRPF39Q86UA1 669 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ATPAF2Q8N5M1 289 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 SLC44A5Q8NCS7 719 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 C11orf70Q9BRQ4 267 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 WWOXQ9NZC7 414 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 KLK14Q9P0G3 267 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 LYVE1Q9Y5Y7 322 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms