RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 PTK7Q13308 1070 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 SEPT7Q16181 437 aaKnown RBP15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 SH3D19Q5HYK7 790 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 RFWD3Q6PCD5 774 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 CEP128Q6ZU80 1094 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 TTC7BQ86TV6 843 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 MCRS1Q96EZ8 462 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 MECRQ9BV79 373 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 LRMDAQ9H2I8 198 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 PLAC1Q9HBJ0 212 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 RAB6BQ9NRW1 208 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 SCN1AP35498 2009 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 HMGCRP04035 888 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 SCUBE3Q8IX30 993 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 MIPEPQ99797 713 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 USP29Q9HBJ7 922 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 TXLNGQ9NUQ3 528 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 GPRC5DQ9NZD1 345 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 SENP1Q9P0U3 644 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 PPEF2O14830 753 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 SKAP2O75563 359 aaPredicted RBP15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 MT-ND3P03897 115 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 PFKMP08237 780 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 TGFB3P10600 412 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 CCND1P24385 295 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 RBL1P28749 1068 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 SLC18A1P54219 525 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 NAA25Q14CX7 972 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 CTC1Q2NKJ3 1217 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 CES4AQ5XG92 561 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 PCGF5Q86SE9 256 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 FNIP1Q8TF40 1166 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 FAF2Q96CS3 445 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 HPDLQ96IR7 371 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 MANSC1Q9H8J5 431 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 NGRNQ9NPE2 291 aaKnown RBP15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 FAM49BQ9NUQ9 324 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 NOP53Q9NZM5 478 aaKnown RBP15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 ZFP69BQ9UJL9 534 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 BPTFQ12830 3046 aa15.16■□□□□ 0.02
CCDC144A-205ENST00000399264 CFAP69A5D8W1 941 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 KCNN4O15554 427 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 MED7O43513 233 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 LPXNO60711 386 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 TXNP10599 105 aaKnown RBP15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 PHBP35232 272 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 ROR1Q01973 937 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 BMPR2Q13873 1038 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 CLNKQ7Z7G1 428 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 CTAGE3PQ8IX95 158 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 TTC13Q8NBP0 860 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 CCDC110Q8TBZ0 833 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 SMYD2Q9NRG4 433 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 ARL8BQ9NVJ2 186 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 HEY2Q9UBP5 337 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 TSPAN16Q9UKR8 245 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 TEX264Q9Y6I9 313 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 PTPRFP10586 1907 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 C2CD4BA6NLJ0 364 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 CYB561D2O14569 222 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 LGR5O75473 907 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 GABBR2O75899 941 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 ZWINTO95229 277 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 INSRRP14616 1297 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 GRIA1P42261 906 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 PPP6R3Q5H9R7 873 aaPredicted RBP15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 PMF1Q6P1K2 205 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 SH2D5Q6ZV89 423 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 ILDR2Q71H61 639 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 PLD5Q8N7P1 536 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 FAM167AQ96KS9 214 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 DENND2DQ9H6A0 471 aaPredicted RBP15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 KCNK13Q9HB14 408 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 EFR3BQ9Y2G0 817 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 NME7Q9Y5B8 376 aa15.15■□□□□ 0.02
CCDC144A-205ENST00000399264 PEX11AO75192 247 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 ARF4P18085 180 aaPredicted RBP15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 ALDH3A1P30838 453 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 SKIV2L2P42285 1042 aaKnown RBP15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 ERFP50548 548 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 ZNF143P52747 638 aaPredicted RBP15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 KCNJ11Q14654 390 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 NOMO1Q15155 1222 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 SURF1Q15526 300 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 AMHR2Q16671 573 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 NOL9Q5SY16 702 aaKnown RBP15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 PQLC3Q8N755 202 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 PDZD7Q9H5P4 517 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 PIH1D1Q9NWS0 290 aaKnown RBP15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 RBPJLQ9UBG7 517 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 TNFSF13BQ9Y275 285 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 WDR90Q96KV7 1748 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 C1QAP02745 245 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 APRTP07741 180 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 SERPINB3P29508 390 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 ETV4P43268 484 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 CCDC14Q49A88 953 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 ANKRD20A2Q5SQ80 823 aa15.14■□□□□ 0.01
CCDC144A-205ENST00000399264 ANKRD20A1Q5TYW2 823 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms