RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 CRABP2P29373 138 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 AXLP30530 894 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 HNRNPH1P31943 449 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 CLK1P49759 484 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 KLK7P49862 253 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 PTENP60484 403 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 HERVK_113P62684 666 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 OOSP2Q86WS3 158 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 USP33Q8TEY7 942 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 TUBGCP3Q96CW5 907 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 PABPC5Q96DU9 382 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 AGAP3Q96P47 875 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 MYOZ2Q9NPC6 264 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 LATS2Q9NRM7 1088 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 TRPM5Q9NZQ8 1165 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 PGK2P07205 417 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 TCF7P36402 384 aaPredicted RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 SCTRP47872 440 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 NPY2RP49146 381 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 ARL4DP49703 201 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 GIT2Q14161 759 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 FBXW10Q5XX13 1052 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 LRRC6Q86X45 466 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 CCDC60Q8IWA6 550 aaPredicted RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC25A41Q8N5S1 370 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 MYCBPAPQ8TBZ2 947 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 AGR3Q8TD06 166 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 CPNE1Q99829 537 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 MAPRE3Q9UPY8 281 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 RUVBL2Q9Y230 463 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP2C9P11712 490 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 PAX3P23760 479 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 SERPINB3P29508 390 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 CDK7P50613 346 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 OAZ1P54368 228 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 RPL10AP62906 217 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 BST2Q10589 180 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 PALB2Q86YC2 1186 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 OSCP1Q8WVF1 389 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 STN1Q9H668 368 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 COMMD8Q9NX08 183 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 F8VZ95 297 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 ITGB3P05106 788 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 SSTR3P32745 418 aaPredicted RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 CHRNB3Q05901 458 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 TTI2Q6NXR4 508 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 SEPT5Q99719 369 aaPredicted RBP8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 TMEM245Q9H330 911 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 DYRK1BQ9Y463 629 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 MROH7Q68CQ1 1323 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 PDZK1P1A8MUH7 402 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 SGPL1O95470 568 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 KRT75O95678 551 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 SOAT1P35610 550 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 CHSY1Q86X52 802 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 LINC00116Q8NCU8 138 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 OR2W6PQ8NHA6 318 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ADGRE3Q9BY15 652 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 CELF4Q9BZC1 486 aaKnown RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 POLG2Q9UHN1 485 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ADGRA2Q96PE1 1338 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF839A8K0R7 811 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 BTNL10A8MVZ5 291 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 STX7O15400 261 aaKnown RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 FCGRTP55899 365 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 PDPK2PQ6A1A2 396 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 DENND5BQ6ZUT9 1274 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 RFX8Q6ZV50 586 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 LRRC8DQ7L1W4 858 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 DDX42Q86XP3 938 aaKnown RBP eCLIP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 REPS1Q96D71 796 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 PAFAH2Q99487 392 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 FUT8Q9BYC5 575 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ARMC7Q9H6L4 198 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 AGO4Q9HCK5 861 aaKnown RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 DMAP1Q9NPF5 467 aaPredicted RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ERCC6L2Q5T890 1561 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 PRRG1O14668 218 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 TRDMT1O14717 391 aaKnown RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 IMPDH2P12268 514 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 TDRD5Q8NAT2 981 aaKnown RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ATP8B4Q8TF62 1192 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 TMEM120AQ9BXJ8 343 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 AVENQ9NQS1 362 aaPredicted RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 GDF3Q9NR23 364 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 PPLO60437 1756 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 CHRM3P20309 590 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 CHI3L1P36222 383 aaPredicted RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 PCSK7Q16549 785 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 C10orf120Q5SQS8 335 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 UBA3Q8TBC4 463 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 DIS3LQ8TF46 1054 aaKnown RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ZDHHC15Q96MV8 337 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 SAR1AQ9NR31 198 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ITGALP20701 1170 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 MGAT5Q09328 741 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms