RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 CHD8Q9HCK8 2581 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 BCLAF3A2AJT9 711 aaKnown RBP11.81□□□□□ -0.52
SRMP1-201ENST00000398959 ALDH1A2O94788 518 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 ZSCAN22P10073 491 aaPredicted RBP11.81□□□□□ -0.52
SRMP1-201ENST00000398959 ADH5P11766 374 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 TIE1P35590 1138 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 EIF2DP41214 584 aaKnown RBP11.81□□□□□ -0.52
SRMP1-201ENST00000398959 SLC6A11P48066 632 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 AP3M2P53677 418 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 CDH8P55286 799 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 KDSRQ06136 332 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 CRY1Q16526 586 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 ST3GAL2Q16842 350 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 GAB4Q2WGN9 574 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 HECTD3Q5T447 861 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 RESP18Q5W5W9 173 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 PMS2CLQ68D20 193 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 FAM35AQ86V20 835 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 GRAMD1CQ8IYS0 662 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 ALLCQ8N6M5 410 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 GOLGA5Q8TBA6 731 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 SMARCD1Q96GM5 515 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 TNIP3Q96KP6 325 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 CNOT6LQ96LI5 555 aaKnown RBP11.81□□□□□ -0.52
SRMP1-201ENST00000398959 KCNK16Q96T55 309 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 GZF1Q9H116 711 aaPredicted RBP11.81□□□□□ -0.52
SRMP1-201ENST00000398959 ANGPTL2Q9UKU9 493 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
SRMP1-201ENST00000398959 PCDHA7Q9UN72 937 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 SH3BP1Q9Y3L3 701 aa11.81□□□□□ -0.52
SRMP1-201ENST00000398959 ASCC3Q8N3C0 2202 aaKnown RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 E2F8A0AVK6 867 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 ANTXRLA6NF34 631 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 LRRIQ3A6PVS8 624 aaPredicted RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 TM4SF5O14894 197 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 COCHO43405 550 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 KRT37O76014 449 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 KAT7O95251 611 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 KLF8O95600 359 aaPredicted RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 F13A1P00488 732 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 PDIA4P13667 645 aaKnown RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 P4HA1P13674 534 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 DHPSP49366 369 aaPredicted RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 SLC5A3P53794 718 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 NCOA4Q13772 614 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 N4BP2L1Q5TBK1 243 aaPredicted RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 RHBDF2Q6PJF5 856 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 CYP2U1Q7Z449 544 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 RASSF3Q86WH2 238 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 C12orf40Q86WS4 652 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 HSCBQ8IWL3 235 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 TXNDC5Q8NBS9 432 aaKnown RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 MDGA1Q8NFP4 955 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 SCAMP5Q8TAC9 235 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 PLEKHO2Q8TD55 490 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 PARD3BQ8TEW8 1205 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 OTUB2Q96DC9 234 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 SPACA7Q96KW9 195 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 LSM14BQ9BX40 385 aaKnown RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 NACA2Q9H009 215 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 VRTNQ9H8Y1 702 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 POLMQ9NP87 494 aaPredicted RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 DMAP1Q9NPF5 467 aaPredicted RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 ARHGEF4Q9NR80 690 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 KRT82Q9NSB4 513 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 EXOC1Q9NV70 894 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 BCCIPQ9P287 314 aaKnown RBP eCLIP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 CHORDC1Q9UHD1 332 aaPredicted RBP11.8□□□□□ -0.52
SRMP1-201ENST00000398959 GON4LQ3T8J9 2241 aa11.8□□□□□ -0.52
SRMP1-201ENST00000398959 LNP1A1A4G5 178 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 KHNYNO15037 678 aaKnown RBP11.79□□□□□ -0.52
SRMP1-201ENST00000398959 MAP3K13O43283 966 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 AP1G2O75843 785 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 KCNK5O95279 499 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 IRF1P10914 325 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 TRIM21P19474 475 aaKnown RBP11.79□□□□□ -0.52
SRMP1-201ENST00000398959 BCKDHBP21953 392 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 GRIA2P42262 883 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 TNFRSF4P43489 277 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 GAD2Q05329 585 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 MESP2Q0VG99 397 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 HSF5Q4G112 596 aaPredicted RBP11.79□□□□□ -0.52
SRMP1-201ENST00000398959 PREPLQ4J6C6 727 aaPredicted RBP11.79□□□□□ -0.52
SRMP1-201ENST00000398959 EOGTQ5NDL2 527 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 LY6G5CQ5SRR4 150 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 BTBD8Q5XKL5 378 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 TMEM92Q6UXU6 159 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 ACOT1Q86TX2 421 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 SFTPA1Q8IWL2 248 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 PGBD3Q8N328 593 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 IL17RCQ8NAC3 791 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 WHAMMQ8TF30 809 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 SNX21Q969T3 373 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 ELMO3Q96BJ8 720 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 CCSER2Q9H7U1 834 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 COMMD8Q9NX08 183 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 GMIPQ9P107 970 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 SERTAD1Q9UHV2 236 aa11.79□□□□□ -0.52
SRMP1-201ENST00000398959 CFAP45Q9UL16 551 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms