RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NFIL3Q16649 462 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 ARID3BQ8IVW6 561 aaPredicted RBP14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 DNAJC18Q9H819 358 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 RRN3Q9NYV6 651 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 TNFSF13BQ9Y275 285 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 PLIN4Q96Q06 1357 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 NCAM2O15394 837 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 HOXA2O43364 376 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 GLRA3O75311 464 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 AKR1A1P14550 325 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 RFC1P35251 1148 aaPredicted RBP14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 ZACNQ401N2 412 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 DDX43Q9NXZ2 648 aaKnown RBP14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 MROH7Q68CQ1 1323 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 ZNF197O14709 1029 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 TMCC1O94876 653 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 CYP2F1P24903 491 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 HADHAP40939 763 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 RAB27AP51159 221 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 NCKAP1LP55160 1127 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 SHROOM1Q2M3G4 852 aaPredicted RBP14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 ERMARDQ5T6L9 678 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 KATNAL2Q8IYT4 538 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 TRIML2Q8N7C3 387 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 LNX1Q8TBB1 728 aaPredicted RBP14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 DCUN1D1Q96GG9 259 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 TMEM169Q96HH4 297 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 TAS2R14Q9NYV8 317 aa14.74□□□□□ -0.05
PCDHGA11-201ENST00000398587 RIPK2O43353 540 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 SLC11A2P49281 568 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 CORO7P57737 925 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 TIGD7Q6NT04 549 aaPredicted RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAM117BQ6P1L5 589 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 ANGPTL8Q6UXH0 198 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 IRF2BP2Q7Z5L9 587 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 ARRDC4Q8NCT1 418 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 FBXO32Q969P5 355 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 CMTM5Q96DZ9 223 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 MAGEB18Q96M61 343 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 KCNK16Q96T55 309 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAF1Q9UNN5 650 aaPredicted RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 RNF103-CHMP3A0A140T963 221 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 H7C4K7 107 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 TRIM66O15016 1216 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 TIMM44O43615 452 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAM153BP0C7A2 387 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 AKAP5P24588 427 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 PSEN2P49810 448 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 YWHAZP63104 245 aaKnown RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 TWF1Q12792 350 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAM153CQ494X1 144 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 PLPPR4Q7Z2D5 763 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 PRUNE1Q86TP1 453 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 ZNF384Q8TF68 577 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAM153AQ9UHL3 310 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 RGPD8O14715 1765 aaPredicted RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 LONP2Q86WA8 852 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 MIB1Q86YT6 1006 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 SOCS4Q8WXH5 440 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 AFF4Q9UHB7 1163 aaKnown RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 PHTF1Q9UMS5 762 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 IGKV6D-41A0A0C4DH26 115 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 ETFBP38117 255 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 AARSP49588 968 aaKnown RBP eCLIP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 ABCE1P61221 599 aaKnown RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 RPL10AP62906 217 aaKnown RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 CAPSQ13938 189 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 RBBP7Q16576 425 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 FBXW10Q5XX13 1052 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 SHCBP1Q8NEM2 672 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 KLRG1Q96E93 195 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 OLA1Q9NTK5 396 aaKnown RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 TSR3Q9UJK0 312 aaKnown RBP14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 SH3BP1Q9Y3L3 701 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 NALCNQ8IZF0 1738 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 NCANO14594 1321 aa14.73□□□□□ -0.05
PCDHGA11-201ENST00000398587 TMEM247A6NEH6 219 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 B2RBV5 119 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 E2F6O75461 281 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 SASH3O75995 380 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 ARHGDIAP52565 204 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 BFSP2Q13515 415 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 NRBF2Q96F24 287 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 MOSPD1Q9UJG1 213 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 ZMYM2Q9UBW7 1377 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 JCHAINP01591 159 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 CYP1A2P05177 515 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 CNTFP26441 200 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 HMOX2P30519 316 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAM83EQ2M2I3 478 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 LCA5Q86VQ0 697 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 CENPKQ9BS16 269 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 ACP6Q9NPH0 428 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 DYRK4Q9NR20 520 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 NAALADL1Q9UQQ1 740 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 FAM208AQ9UK61 1670 aaKnown RBP14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 TTC36A6NLP5 189 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 ANGPT2O15123 496 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 MYO1DO94832 1006 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 HIST1H2AGP0C0S8 130 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms