RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MAP7D1Q3KQU3 841 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 LY6G5CQ5SRR4 150 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 SH3PXD2AQ5TCZ1 1133 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 SNX30Q5VWJ9 437 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 DAB2IPQ5VWQ8 1189 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 SHC4Q6S5L8 630 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 ETFBKMTQ8IXQ9 262 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 SCAMP5Q8TAC9 235 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 PIGKQ92643 395 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 C7orf25Q9BPX7 421 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 TMEM121BQ9BXQ6 578 aaPredicted RBP12.8□□□□□ -0.36
TFF3-202ENST00000398431 LRRC27Q9C0I9 530 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 TMEM9BQ9NQ34 198 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 RALYQ9UKM9 306 aaKnown RBP12.8□□□□□ -0.36
TFF3-202ENST00000398431 TNRC6BQ9UPQ9 1833 aaKnown RBP12.8□□□□□ -0.36
TFF3-202ENST00000398431 CFAP47Q6ZTR5 3102 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 E2F8A0AVK6 867 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 A8MXQ7 604 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 SPTLC2O15270 562 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 COCHO43405 550 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 PPP6R2O75170 966 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 APODP05090 189 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 ZDHHC11BP0C7U3 371 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 CEACAM1P13688 526 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 SPINK2P20155 84 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 YWHAQP27348 245 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 CASP1P29466 404 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 GRIA2P42262 883 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 PTGER3P43115 390 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 TNFRSF4P43489 277 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 PGFP49763 221 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 CYP2J2P51589 502 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 ASIC1P78348 528 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 IFRD2Q12894 506 aaPredicted RBP12.79□□□□□ -0.36
TFF3-202ENST00000398431 HSF5Q4G112 596 aaPredicted RBP12.79□□□□□ -0.36
TFF3-202ENST00000398431 FAM26FQ5R3K3 315 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 TTC30AQ86WT1 665 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 NELFCDQ8IXH7 590 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 TMEFF1Q8IYR6 380 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 XXYLT1Q8NBI6 393 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 B3GALNT2Q8NCR0 500 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 ELMO3Q96BJ8 720 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 DHX58Q96C10 678 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 INTS4Q96HW7 963 aaKnown RBP12.79□□□□□ -0.36
TFF3-202ENST00000398431 SLITRK1Q96PX8 696 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 ELOVL4Q9GZR5 314 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 SDCBP2Q9H190 292 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 CUEDC2Q9H467 287 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 ZSCAN16Q9H4T2 348 aaPredicted RBP12.79□□□□□ -0.36
TFF3-202ENST00000398431 VRTNQ9H8Y1 702 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 ARHGEF4Q9NR80 690 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 TBC1D14Q9P2M4 693 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 NXF1Q9UBU9 619 aaKnown RBP12.79□□□□□ -0.36
TFF3-202ENST00000398431 EVLQ9UI08 416 aaPredicted RBP12.79□□□□□ -0.36
TFF3-202ENST00000398431 FRYQ5TBA9 3013 aa12.79□□□□□ -0.36
TFF3-202ENST00000398431 PLXND1Q9Y4D7 1925 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 ZFHX4Q86UP3 3567 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 FAM92AA1XBS5 289 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 TRIM24O15164 1050 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 STX6O43752 255 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 GREM1O60565 184 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 C4BPAP04003 597 aaKnown RBP12.78□□□□□ -0.36
TFF3-202ENST00000398431 ADH5P11766 374 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 ATICP31939 592 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 CASP4P49662 377 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 SNRPFP62306 86 aaKnown RBP12.78□□□□□ -0.36
TFF3-202ENST00000398431 TNNC1P63316 161 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 GAD2Q05329 585 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 FOXC1Q12948 553 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 STK38Q15208 465 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 EOGTQ5NDL2 527 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 LPCAT2Q7L5N7 544 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 TMEM25Q86YD3 366 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 C12orf56Q8IXR9 622 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 NAT16Q8N8M0 369 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 KDF1Q8NAX2 398 aaPredicted RBP12.78□□□□□ -0.36
TFF3-202ENST00000398431 ZMIZ2Q8NF64 920 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 OVCA2Q8WZ82 227 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 DUSP9Q99956 384 aaKnown RBP12.78□□□□□ -0.36
TFF3-202ENST00000398431 CCSER2Q9H7U1 834 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 CEP295Q9C0D2 2601 aa12.78□□□□□ -0.36
TFF3-202ENST00000398431 TULP3O75386 442 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 BEST1O76090 585 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
TFF3-202ENST00000398431 ADH1CP00326 375 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 CLDN10P78369 228 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 AMPD3Q01432 767 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 KDSRQ06136 332 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 TRPC3Q13507 836 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 UAP1L1Q3KQV9 507 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 TRIM61Q5EBN2 209 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 HECTD3Q5T447 861 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 PEAR1Q5VY43 1037 aaPredicted RBP12.77□□□□□ -0.37
TFF3-202ENST00000398431 UNQ6494/PRO21346Q6UXR6 183 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms