RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 INPP5FQ9Y2H2 1132 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 MAFBQ9Y5Q3 323 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 MYH6P13533 1939 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 LOC100653049A0A140TA62 436 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 E5RJQ4 531 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 FCHO1O14526 889 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 KRT34O76011 436 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TRUB2O95900 331 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 SNRPAP09012 282 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 PYGBP11216 843 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 MORF4L2Q15014 288 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 OTOAQ7RTW8 1153 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 PRPF39Q86UA1 669 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 GBP7Q8N8V2 638 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 PCYT2Q99447 389 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TUBB6Q9BUF5 446 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 PAK5Q9P286 719 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 CAPN9O14815 690 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 PAX7P23759 505 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 KLRC2P26717 231 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 IL1R2P27930 398 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 PTPN4P29074 926 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 AP1B1Q10567 949 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TMEM154Q6P9G4 183 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 DPP9Q86TI2 863 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ARID3BQ8IVW6 561 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ARHGAP24Q8N264 748 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 CDKL2Q92772 493 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 KLRG1Q96E93 195 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 SMARCAD1Q9H4L7 1026 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ARMCX1Q9P291 453 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 C15orf41Q9Y2V0 281 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 PMM2O15305 246 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 MAP3K7O43318 606 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 HBP1O60381 514 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 CCDC22O60826 627 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ALADP13716 330 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 RPS12P25398 132 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 POLE2P56282 527 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 YWHAZP63104 245 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 MAP3K10Q02779 954 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TMEM132DQ14C87 1099 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 ATG16L1Q676U5 607 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 GPR20Q99678 358 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 TRIM56Q9BRZ2 755 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 FOXP3Q9BZS1 431 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 UNKQ9C0B0 810 aaKnown RBP5.13□□□□□ -1.59
SMAD4-202ENST00000398417 CYP4F11Q9HBI6 524 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 LGALS13Q9UHV8 139 aa5.13□□□□□ -1.59
SMAD4-202ENST00000398417 GRIN3BO60391 1043 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ATP5HO75947 161 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 FARP2O94887 1054 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 HSPA4LO95757 839 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 HMGCRP04035 888 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 RARBP10826 455 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 INSRRP14616 1297 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 EIF4BP23588 611 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ATXN3P54252 364 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MSS51Q4VC12 460 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 C9orf131Q5VYM1 1079 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 FAM228AQ86W67 206 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 NDUFAF2Q8N183 169 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SPATA18Q8TC71 538 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MRPL45Q9BRJ2 306 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 RNF181Q9P0P0 153 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ARIH1Q9Y4X5 557 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 KRT36O76013 467 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ABHD2P08910 425 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MCF2P10911 925 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TPH1P17752 444 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ACAT1P24752 427 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 IREB2P48200 963 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MRPS35P82673 323 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 FAM47CQ5HY64 1035 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 LRRC38Q5VT99 294 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TTC39BQ5VTQ0 682 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 FKBP1CQ5VVH2 108 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 HEATR6Q6AI08 1181 aaKnown RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 POTEAQ6S8J7 498 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 TRIM42Q8IWZ5 723 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SLC25A41Q8N5S1 370 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ARL10Q8N8L6 244 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 BEST2Q8NFU1 509 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SDCBP2Q9H190 292 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 SMYD2Q9NRG4 433 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ETNK2Q9NVF9 386 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 HMGXB4Q9UGU5 601 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ADAMTSL3P82987 1691 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 WDR27A2RRH5 827 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CCDC160A6NGH7 325 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 KRT38O76015 456 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 UPP2O95045 317 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 CHRM1P11229 460 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-202ENST00000398417 RABGGTBP53611 331 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 IL1RL1Q01638 556 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 ZNF252P-AS1Q0IIN9 211 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 NOMO1Q15155 1222 aa5.12□□□□□ -1.59
SMAD4-202ENST00000398417 MFSD5Q6N075 450 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms