RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 H3BRB1 525 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PFKMP08237 780 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 KRT4P19013 534 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GEMIN4P57678 1058 aaKnown RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RBP5P82980 135 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MKRN3Q13064 507 aaKnown RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SCYL2Q6P3W7 929 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 C1orf228Q6PIY5 440 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 IFNLR1Q8IU57 520 aaPredicted RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TUT1Q9H6E5 874 aaKnown RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RSAD1Q9HA92 442 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GPATCH2LQ9NWQ4 482 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SCN1AP35498 2009 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PPEF2O14830 753 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PRPF4O43172 522 aaKnown RBP eCLIP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ELF3P78545 371 aaPredicted RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 INCA1Q0VD86 236 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 DPYSL3Q14195 570 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 EFHC2Q5JST6 749 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ARMC3Q5W041 872 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 DARS2Q6PI48 645 aaKnown RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ATP11CQ8NB49 1132 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PPTC7Q8NI37 304 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 LRRN4Q8WUT4 740 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 NSMCE1Q8WV22 266 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FAM210AQ96ND0 272 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CNPY3Q9BT09 278 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 NT5C1AQ9BXI3 368 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FRMD8P1Q9BZ68 369 aaPredicted RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 BATF3Q9NR55 127 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FAM49BQ9NUQ9 324 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SLC24A2Q9UI40 661 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ITGA11Q9UKX5 1188 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PCK1P35558 622 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SPARCL1Q14515 664 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ACAP1Q15027 740 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GOLGA7BQ2TAP0 167 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ZNF792Q3KQV3 632 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PPP1R26Q5T8A7 1209 aaPredicted RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 THEMIS2Q5TEJ8 643 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CAPRIN2Q6IMN6 1127 aaKnown RBP19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 LCLAT1Q6UWP7 414 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PALM2Q8IXS6 379 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ECT2Q9H8V3 914 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CHMP2BQ9UQN3 213 aa19.15■□□□□ 0.66
CHRFAM7A-202ENST00000397827 NCALDP61601 193 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KIZQ2M2Z5 673 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GALNTL6Q49A17 601 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PMF1Q6P1K2 205 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ACOT1Q86TX2 421 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CCDC125Q86Z20 511 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 IGDCC3Q8IVU1 814 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PDIK1LQ8N165 341 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PAFAH2Q99487 392 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 MRPL45Q9BRJ2 306 aaKnown RBP19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 NGRNQ9NPE2 291 aaKnown RBP19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KLHL14Q9P2G3 628 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 C2CD2Q9Y426 696 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SNX9Q9Y5X1 595 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GOLGA8RI6L899 631 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 NDC80O14777 642 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TYROBPO43914 113 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PRPSAP2O60256 369 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CDC25CP30307 473 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PHBP35232 272 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KCNJ2P63252 427 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ROR1Q01973 937 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 MARCH8Q5T0T0 291 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PNMA8AQ86V59 439 aaPredicted RBP19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GPRC5AQ8NFJ5 357 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KLF6Q99612 283 aaPredicted RBP19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 LPIN3Q9BQK8 851 aa19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 C12orf65Q9H3J6 166 aaKnown RBP19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ZMYND8Q9ULU4 1186 aaPredicted RBP19.14■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CCDC14Q49A88 953 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 BZW1Q7L1Q6 419 aaKnown RBP19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ECHDC2Q86YB7 292 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SCUBE3Q8IX30 993 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SHCBP1Q8NEM2 672 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 STAMBPL1Q96FJ0 436 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PHTF1Q9UMS5 762 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SMG5Q9UPR3 1016 aaKnown RBP19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 HES2Q9Y543 173 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TTC36A6NLP5 189 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 E7ESA3 106 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 AVILO75366 819 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ENDOD1O94919 500 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GCLCP48506 637 aaPredicted RBP19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SNAPC2Q13487 334 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 NOMO1Q15155 1222 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TTC30AQ86WT1 665 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KIF2BQ8N4N8 673 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ZMAT2Q96NC0 199 aaKnown RBP19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 B3GNT5Q9BYG0 378 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GBA2Q9HCG7 927 aaPredicted RBP19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SENP1Q9P0U3 644 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 BAIAP2L1Q9UHR4 511 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 NME7Q9Y5B8 376 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms