RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 TCRBV21S2A2A0A5A6 115 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 F8VP50 259 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 TULP1O00294 542 aaPredicted RBP17.17■□□□□ 0.34
CUX2-202ENST00000397643 SLC9A3R1O14745 358 aaPredicted RBP17.17■□□□□ 0.34
CUX2-202ENST00000397643 MAP3K13O43283 966 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 GCNT3O95395 438 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 BMP15O95972 392 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 APODP05090 189 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 TMEM191BP0C7N4 346 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 WARSP23381 471 aaKnown RBP17.17■□□□□ 0.34
CUX2-202ENST00000397643 GRIA2P42262 883 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 CACNA2D1P54289 1103 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 SF3A1Q15459 793 aaKnown RBP17.17■□□□□ 0.34
CUX2-202ENST00000397643 ETFBKMTQ8IXQ9 262 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 HPDLQ96IR7 371 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 ZFRQ96KR1 1074 aaKnown RBP17.17■□□□□ 0.34
CUX2-202ENST00000397643 ZNF396Q96N95 335 aaPredicted RBP17.17■□□□□ 0.34
CUX2-202ENST00000397643 INTS13Q9NVM9 706 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 BCCIPQ9P287 314 aaKnown RBP eCLIP17.17■□□□□ 0.34
CUX2-202ENST00000397643 STK17AQ9UEE5 414 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 HCN2Q9UL51 889 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 CEP192Q8TEP8 1941 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 CELSR3Q9NYQ7 3312 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 LOC400499M0QZD8 3231 aa17.17■□□□□ 0.34
CUX2-202ENST00000397643 FRMD3A2A2Y4 597 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 TRIM66O15016 1216 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 ADH1CP00326 375 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 PDGFRBP09619 1106 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 ADH5P11766 374 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 GAP43P17677 238 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 DPP6P42658 865 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 TNFRSF4P43489 277 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 PPP3CCP48454 512 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 CYP27A1Q02318 531 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 TAF10Q12962 218 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 MAPRE1Q15691 268 aaKnown RBP17.16■□□□□ 0.34
CUX2-202ENST00000397643 LY6G5CQ5SRR4 150 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 MYCBPAPQ8TBZ2 947 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 C8orf48Q96LL4 319 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 PCIF1Q9H4Z3 704 aa17.16■□□□□ 0.34
CUX2-202ENST00000397643 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.15■□□□□ 0.34
CUX2-202ENST00000397643 CFIP05156 583 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 SERPINF2P08697 491 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 GABRG2P18507 467 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 ANXA13P27216 316 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 MYO1EQ12965 1108 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 MDH1BQ5I0G3 518 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 RAB44Q7Z6P3 723 aaPredicted RBP17.15■□□□□ 0.34
CUX2-202ENST00000397643 GPD1LQ8N335 351 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 CHCHD4Q8N4Q1 142 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 OR2I1PQ8NGU4 316 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 ANKRD36BP1Q96IX9 119 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 MRPL45Q9BRJ2 306 aaKnown RBP17.15■□□□□ 0.34
CUX2-202ENST00000397643 CD248Q9HCU0 757 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 EHD2Q9NZN4 543 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 SLC6A14Q9UN76 642 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 PCDHB13Q9Y5F0 798 aa17.15■□□□□ 0.34
CUX2-202ENST00000397643 AP5Z1O43299 807 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 CD59P13987 128 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 BYSLQ13895 437 aaKnown RBP17.14■□□□□ 0.33
CUX2-202ENST00000397643 DUOXA1Q1HG43 343 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 ATL3Q6DD88 541 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 FAM173BQ6P4H8 233 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 PROSER1Q86XN7 944 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 MIB1Q86YT6 1006 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 CBWD2Q8IUF1 395 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 DEFB119Q8N690 84 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 CEP76Q8TAP6 659 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 GTPBP2Q9BX10 602 aaKnown RBP17.14■□□□□ 0.33
CUX2-202ENST00000397643 ZNF518BQ9C0D4 1074 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 CALCOCO1Q9P1Z2 691 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 IGSF10Q6WRI0 2623 aa17.14■□□□□ 0.33
CUX2-202ENST00000397643 APC2O95996 2303 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 IGHV1OR15-9A0A0B4J2B8 117 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 A0A1W2PQF6 199 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 E2F8A0AVK6 867 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 H0Y626 953 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 HOXC11O43248 304 aaPredicted RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 OPHN1O60890 802 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 TULP3O75386 442 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 TRIM16O95361 564 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 ABL1P00519 1130 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 MBL2P11226 248 aaPredicted RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 RPL6Q02878 288 aaKnown RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 GFPT1Q06210 699 aaPredicted RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 ALCAMQ13740 583 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 FOXD4L6Q3SYB3 417 aaPredicted RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 FOXD4L3Q6VB84 417 aaPredicted RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 DDX42Q86XP3 938 aaKnown RBP eCLIP17.13■□□□□ 0.33
CUX2-202ENST00000397643 SLC41A1Q8IVJ1 513 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 PGBD3Q8N328 593 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 HDDC3Q8N4P3 179 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 MINDY1Q8N5J2 469 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 ZNF513Q8N8E2 541 aaPredicted RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 KCNV2Q8TDN2 545 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 NOC3LQ8WTT2 800 aaKnown RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 DPEP3Q9H4B8 488 aa17.13■□□□□ 0.33
CUX2-202ENST00000397643 DNAAF2Q9NVR5 837 aaKnown RBP17.13■□□□□ 0.33
CUX2-202ENST00000397643 TBC1D14Q9P2M4 693 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms