RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PPP1R3BQ86XI6 285 aa7.2□□□□□ -1.26
SMCO1-201ENST00000397537 TUSC5Q8IXB3 177 aa7.2□□□□□ -1.26
SMCO1-201ENST00000397537 DRAXINQ8NBI3 349 aaPredicted RBP7.2□□□□□ -1.26
SMCO1-201ENST00000397537 RNF139Q8WU17 664 aa7.2□□□□□ -1.26
SMCO1-201ENST00000397537 LENG8Q96PV6 779 aaPredicted RBP7.2□□□□□ -1.26
SMCO1-201ENST00000397537 MYL10Q9BUA6 226 aa7.2□□□□□ -1.26
SMCO1-201ENST00000397537 G6PC2Q9NQR9 355 aa7.2□□□□□ -1.26
SMCO1-201ENST00000397537 PTBP2Q9UKA9 531 aaKnown RBP7.2□□□□□ -1.26
SMCO1-201ENST00000397537 KLHL20Q9Y2M5 609 aa7.2□□□□□ -1.26
SMCO1-201ENST00000397537 IL16Q14005 1332 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 KRBA1A5PL33 1030 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 SOBPA7XYQ1 873 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 LACTBL1A8MY62 500 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 STX16-NPEPL1H3BU86 382 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 H7BY64 318 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 STX16O14662 325 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 TGFB1I1O43294 461 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 DNPH1O43598 174 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 NOL3O60936 208 aaKnown RBP7.19□□□□□ -1.26
SMCO1-201ENST00000397537 WFS1O76024 890 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 C22orf31O95567 290 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 IFNB1P01574 187 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 CELA3BP08861 270 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 HMOX1P09601 288 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 CD33P20138 364 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 KELP23276 732 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 ASMTP46597 345 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 CPT1AP50416 773 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 BCAT1P54687 386 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 RPP30P78346 268 aaKnown RBP7.19□□□□□ -1.26
SMCO1-201ENST00000397537 MRPS5P82675 430 aaKnown RBP7.19□□□□□ -1.26
SMCO1-201ENST00000397537 HNRNPUQ00839 825 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMCO1-201ENST00000397537 CCDC15Q0P6D6 951 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 CAMK2DQ13557 499 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 CRTC3Q6UUV7 619 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 Q6ZNB5 142 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 DZIP1Q86YF9 867 aaKnown RBP7.19□□□□□ -1.26
SMCO1-201ENST00000397537 PHYKPLQ8IUZ5 450 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 UNC5CLQ8IV45 518 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 LINC00346Q8IVM7 164 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 ULK2Q8IYT8 1036 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 GOLGA6L1Q8N7Z2 621 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 RNF214Q8ND24 703 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 KIAA1524Q8TCG1 905 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 FATE1Q969F0 183 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 RMDN1Q96DB5 314 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 FER1L6-AS2Q96M78 137 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 ZNF396Q96N95 335 aaPredicted RBP7.19□□□□□ -1.26
SMCO1-201ENST00000397537 PRAM1Q96QH2 718 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 AGAP2Q99490 1192 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 FUZQ9BT04 418 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 KLHL4Q9C0H6 718 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 MROH8Q9H579 483 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 TASP1Q9H6P5 420 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 DDX18Q9NVP1 670 aaKnown RBP7.19□□□□□ -1.26
SMCO1-201ENST00000397537 TAS2R10Q9NYW0 307 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 NDUFAF4Q9P032 175 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 PRSS50Q9UI38 385 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 DERAQ9Y315 318 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 MARF1Q9Y4F3 1742 aaKnown RBP7.19□□□□□ -1.26
SMCO1-201ENST00000397537 MBD5Q9P267 1494 aa7.19□□□□□ -1.26
SMCO1-201ENST00000397537 hCG_1809904A0A1W2PP81 198 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 A0A1W2PPE2 198 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 A0A1W2PR64 198 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 NPIPB15A6NHN6 443 aaPredicted RBP7.18□□□□□ -1.26
SMCO1-201ENST00000397537 IKBKBO14920 756 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 MCF2LO15068 1137 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 NEMFO60524 1076 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 ADAMTS4O75173 837 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 LRRN2O75325 713 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 ADCY5O95622 1261 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 DLGAP3O95886 979 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 TPM3P06753 285 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 PGM1P36871 562 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 PAFAH1B1P43034 410 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 CARSP49589 748 aaKnown RBP7.18□□□□□ -1.26
SMCO1-201ENST00000397537 HSD17B4P51659 736 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 RARSP54136 660 aaKnown RBP7.18□□□□□ -1.26
SMCO1-201ENST00000397537 ATP8B2P98198 1209 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 ID3Q02535 119 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 TBC1D8BQ0IIM8 1120 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 MYO1EQ12965 1108 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 IRF3Q14653 427 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 SSPNQ14714 243 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 MAN2A1Q16706 1144 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 ZNF628Q5EBL2 1059 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 HABP4Q5JVS0 413 aaKnown RBP7.18□□□□□ -1.26
SMCO1-201ENST00000397537 ARHGAP11AQ6P4F7 1023 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 INO80CQ6PI98 192 aaPredicted RBP7.18□□□□□ -1.26
SMCO1-201ENST00000397537 ISLR2Q6UXK2 745 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 OTOAQ7RTW8 1153 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 CCDC186Q7Z3E2 898 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 RABEPKQ7Z6M1 372 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 LINC00528Q8N1L1 170 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 GMCL1P1Q8NEA9 526 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 SCFD2Q8WU76 684 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 KBTBD7Q8WVZ9 684 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 CDCA5Q96FF9 252 aa7.18□□□□□ -1.26
SMCO1-201ENST00000397537 PERPQ96FX8 193 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms