RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MAGEA4P43358 317 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 GALK1P51570 392 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 GDF10P55107 478 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 NOMO3P69849 1222 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 GCNT1Q02742 428 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 NFX1Q12986 1120 aaKnown RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 CYP1B1Q16678 543 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ACSBG2Q5FVE4 666 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 SH3D19Q5HYK7 790 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 LIN9Q5TKA1 542 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 GPAT2Q6NUI2 795 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 TMEM53Q6P2H8 277 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 RFWD3Q6PCD5 774 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 IZUMO2Q6UXV1 221 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 RHPN2Q8IUC4 686 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ZNF280CQ8ND82 737 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 PRPF31Q8WWY3 499 aaKnown RBP5.24□□□□□ -1.57
SSR1-202ENST00000397511 DHRS1Q96LJ7 313 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ARPC5LQ9BPX5 153 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 EPB41L1Q9H4G0 881 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 PGAP2Q9UHJ9 254 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 ZFP69BQ9UJL9 534 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 GINS2Q9Y248 185 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 BPTFQ12830 3046 aa5.24□□□□□ -1.57
SSR1-202ENST00000397511 HTR3EA5X5Y0 456 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 INO80B-WBP1J3KQ70 363 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 B4GALT5O43286 388 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PDE5AO76074 875 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 STBD1O95210 358 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 GGPS1O95749 300 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 NAT1P18440 290 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TAC1P20366 129 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ACO1P21399 889 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 CA4P22748 312 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 NEK3P51956 506 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 OVGP1Q12889 678 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PDIA2Q13087 525 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 PKN2Q16513 984 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 RAB6CQ53S08 254 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 HSP90AA5PQ58FG0 334 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ABHD15Q6UXT9 468 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 DSTYKQ6XUX3 929 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 NANOGNBQ7Z5D8 188 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TMEM192Q8IY95 271 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ABRAQ8N0Z2 381 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 VPS52Q8N1B4 723 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ARHGAP24Q8N264 748 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 RNF149Q8NC42 400 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 MCPH1Q8NEM0 835 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 DQX1Q8TE96 717 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 HSPH1Q92598 858 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ECSITQ9BQ95 431 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 SENP7Q9BQF6 1050 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 CALN1Q9BXU9 219 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 IMPG2Q9BZV3 1241 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 INO80BQ9C086 356 aaPredicted RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 RAB6CQ9H0N0 254 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 INIPQ9NRY2 104 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 KRT82Q9NSB4 513 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 CLIC5Q9NZA1 410 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ARHGAP28Q9P2N2 729 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 DCTN4Q9UJW0 460 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 POLIQ9UNA4 740 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 A8MXQ7 604 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 LYPLA2O95372 231 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ITGBL1O95965 494 aaPredicted RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 PTPRAP18433 802 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 FOXN2P32314 431 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 RPA3P35244 121 aaPredicted RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 RFC1P35251 1148 aaPredicted RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 CENPCQ03188 943 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ZNF252P-AS1Q0IIN9 211 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TRPC3Q13507 836 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 HSDL1Q3SXM5 330 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TAF1BQ53T94 588 aaPredicted RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 TREML2Q5T2D2 321 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 GJC2Q5T442 439 aaPredicted RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 DNAJC24Q6P3W2 148 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 ACAD11Q709F0 780 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TRMT10CQ7L0Y3 403 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 KBTBD2Q8IY47 623 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 SAMD3Q8N6K7 520 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 CCDC89Q8N998 374 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 NETO2Q8NC67 525 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 CEP70Q8NHQ1 597 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 FEZF2Q8TBJ5 459 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PIP4K2CQ8TBX8 421 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TMC2Q8TDI7 906 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 TFAP2BQ92481 460 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 PMM1Q92871 262 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 KCNN1Q92952 543 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 DNAJC1Q96KC8 554 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 FBXL18Q96ME1 805 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 NTPCRQ9BSD7 190 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 BTBD10Q9BSF8 475 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 CADM1Q9BY67 442 aaKnown RBP5.23□□□□□ -1.57
SSR1-202ENST00000397511 ST6GALNAC4Q9H4F1 302 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 CISHQ9NSE2 258 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 WHRNQ9P202 907 aa5.23□□□□□ -1.57
SSR1-202ENST00000397511 CCDC160A6NGH7 325 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms