RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 JRKLQ9Y4A0 524 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 MYO9BQ13459 2157 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 ZBED1O96006 694 aa22.24■■□□□ 1.15
CPNE1-204ENST00000397443 HAPLN1P10915 354 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-204ENST00000397443 PSMA2P25787 234 aa22.24■■□□□ 1.15
CPNE1-204ENST00000397443 SSR1P43307 286 aaKnown RBP22.24■■□□□ 1.15
CPNE1-204ENST00000397443 MAGEA11P43364 429 aa22.24■■□□□ 1.15
CPNE1-204ENST00000397443 C11orf63Q6NUN7 778 aa22.24■■□□□ 1.15
CPNE1-204ENST00000397443 ZDHHC17Q8IUH5 632 aa22.24■■□□□ 1.15
CPNE1-204ENST00000397443 UBXN6Q9BZV1 441 aa22.24■■□□□ 1.15
CPNE1-204ENST00000397443 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.24■■□□□ 1.15
CPNE1-204ENST00000397443 AFF4Q9UHB7 1163 aaKnown RBP22.24■■□□□ 1.15
CPNE1-204ENST00000397443 MSRAQ9UJ68 235 aa22.24■■□□□ 1.15
CPNE1-204ENST00000397443 SPOPO43791 374 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 TUBB4AP04350 444 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 ZNF252P-AS1Q0IIN9 211 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 PPP2R2DQ66LE6 453 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 TRNP1Q6NT89 227 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 HFE2Q6ZVN8 426 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 SLFN11Q7Z7L1 901 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 C2orf15Q8WU43 125 aaKnown RBP22.23■■□□□ 1.15
CPNE1-204ENST00000397443 KHSRPQ92945 711 aaKnown RBP eCLIP22.23■■□□□ 1.158e-8■■■□□ 15.7
CPNE1-204ENST00000397443 C8orf48Q96LL4 319 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 IP6K2Q9UHH9 426 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 TMEM59LQ9UK28 342 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 AMFRQ9UKV5 643 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 LZTS1Q9Y250 596 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 YJEFN3A6XGL0 299 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 E7ENQ6 273 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 C5orf67F2Z3F1 127 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 URI1O94763 535 aaPredicted RBP22.23■■□□□ 1.15
CPNE1-204ENST00000397443 ABLIM3O94929 683 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 PDGFRAP16234 1089 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 IRS1P35568 1242 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 MTMR3Q13615 1198 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 RAB33AQ14088 237 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 NT5DC3Q86UY8 548 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 RXFP2Q8WXD0 754 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 ARNTL2Q8WYA1 636 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 CFAP57Q96MR6 1250 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 PNPLA8Q9NP80 782 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 SSX2IPQ9Y2D8 614 aa22.23■■□□□ 1.15
CPNE1-204ENST00000397443 PRRG1O14668 218 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 TNFRSF10BO14763 440 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 PROSCO94903 275 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 FBXO21O94952 628 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 ATF2P15336 505 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 DAOAP59103 153 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 USP46P62068 366 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 GPM6BQ13491 265 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 CDO1Q16878 200 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 MEI1Q5TIA1 1274 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 SLC26A9Q7LBE3 791 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 TDHQ8IZJ6 230 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 TLR10Q9BXR5 811 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 RXFP1Q9HBX9 757 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 CNGB3Q9NQW8 809 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 FNIP2Q9P278 1114 aa22.22■■□□□ 1.15
CPNE1-204ENST00000397443 RB1P06400 928 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 ATF6P18850 670 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 KLRC2P26717 231 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 CXCR5P32302 372 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 ELF1P32519 619 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 ERVK-21P61565 698 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 ATP11AP98196 1134 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 CREMQ03060 361 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 SMC1AQ14683 1233 aaKnown RBP22.21■■□□□ 1.15
CPNE1-204ENST00000397443 C15orf59Q2T9L4 293 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-204ENST00000397443 EFHC1Q5JVL4 640 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 TPGS2Q68CL5 300 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 CHRDL2Q6WN34 429 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 NUP93Q8N1F7 819 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 CALR3Q96L12 384 aaKnown RBP22.21■■□□□ 1.15
CPNE1-204ENST00000397443 MAGED2Q9UNF1 606 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-204ENST00000397443 PATJQ8NI35 1801 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 C2orf71A6NGG8 1288 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 C2CD4BA6NLJ0 364 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 SRGAP2O75044 1071 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 GPD1P21695 349 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 GJC1P36383 396 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 RPL10AP62906 217 aaKnown RBP22.21■■□□□ 1.15
CPNE1-204ENST00000397443 CAMK1Q14012 370 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 SH3PXD2AQ5TCZ1 1133 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 KLHL5Q96PQ7 755 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 SLC28A3Q9HAS3 691 aa22.21■■□□□ 1.15
CPNE1-204ENST00000397443 TGM5O43548 720 aa22.2■■□□□ 1.14
CPNE1-204ENST00000397443 TUFMP49411 452 aaKnown RBP22.2■■□□□ 1.14
CPNE1-204ENST00000397443 YWHAZP63104 245 aaKnown RBP22.2■■□□□ 1.14
CPNE1-204ENST00000397443 RPS6KA1Q15418 735 aa22.2■■□□□ 1.14
CPNE1-204ENST00000397443 RAB30Q15771 203 aa22.2■■□□□ 1.14
CPNE1-204ENST00000397443 DCAF6Q58WW2 860 aa22.2■■□□□ 1.14
CPNE1-204ENST00000397443 DENND5BQ6ZUT9 1274 aa22.2■■□□□ 1.14
CPNE1-204ENST00000397443 DEFB106AQ8N104 65 aa22.2■■□□□ 1.14
CPNE1-204ENST00000397443 MRPL43Q8N983 215 aaKnown RBP22.2■■□□□ 1.14
CPNE1-204ENST00000397443 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-204ENST00000397443 EDEM1Q92611 657 aa22.2■■□□□ 1.14
CPNE1-204ENST00000397443 EMILIN2Q9BXX0 1053 aa22.2■■□□□ 1.14
CPNE1-204ENST00000397443 LPXNO60711 386 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 HSF2BPO75031 334 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 ADH1AP07327 375 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms