RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ROR1Q01973 937 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 SMARCB1Q12824 385 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 ZNF268Q14587 947 aaPredicted RBP17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 DUSP6Q16828 381 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 PUS10Q3MIT2 529 aaKnown RBP17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 PPP1R15BQ5SWA1 713 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 RNF19BQ6ZMZ0 732 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 AUTS2Q8WXX7 1259 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 PGLYRP2Q96PD5 576 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 NUP85Q9BW27 656 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 SYNCQ9H7C4 482 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 ABCB6Q9NP58 842 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 DMAP1Q9NPF5 467 aaPredicted RBP17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 MRPL17Q9NRX2 175 aaKnown RBP17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 ABI2Q9NYB9 513 aaPredicted RBP17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 CTTNBP2NLQ9P2B4 639 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 WDR35Q9P2L0 1181 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 PI4K2BG5E9Z4 385 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 PIK3R2O00459 728 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 KIF5CO60282 957 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 OR1D2P34982 312 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 MAGEA11P43364 429 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 ACADSBP45954 432 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 NOP2P46087 812 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 MAMLD1Q13495 774 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 PLPP4Q5VZY2 271 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 SMRP1Q8NCR6 262 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 C3orf20Q8ND61 904 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 SPPL2BQ8TCT7 592 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 C2orf15Q8WU43 125 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 MCRS1Q96EZ8 462 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 MIS12Q9H081 205 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 RXFP1Q9HBX9 757 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 PNPLA8Q9NP80 782 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 PARVAQ9NVD7 372 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 FNIP2Q9P278 1114 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 CD207Q9UJ71 328 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 SCINQ9Y6U3 715 aa17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 ZNF638Q14966 1978 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-205ENST00000397406 PAPSS1O43252 624 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 SNX16P57768 344 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 ETF1P62495 437 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 SMAD4Q13485 552 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 RAB41Q5JT25 222 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 ZNF569Q5MCW4 686 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 DNAJC24Q6P3W2 148 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 VSTM1Q6UX27 236 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 FAM183BPQ6ZVS7 135 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 TTC9BQ8N6N2 239 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 ATAD1Q8NBU5 361 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 TPCN2Q8NHX9 752 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 ZNF564Q8TBZ8 553 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 MICAL1Q8TDZ2 1067 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 TCF25Q9BQ70 676 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 CRISPLD1Q9H336 500 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 TLE6Q9H808 572 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 MRPL47Q9HD33 250 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 SSX2IPQ9Y2D8 614 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 GRID2IPA4D2P6 1211 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 F8VP50 259 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 ABLIM3O94929 683 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 GJB6O95452 261 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 COL9A1P20849 921 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 NDUFV1P49821 464 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 NAP1L1P55209 391 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 GNG11P61952 73 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 OR6B2Q6IFH4 312 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 OLFML1Q6UWY5 402 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 GPRIN1Q7Z2K8 1008 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 ADHFE1Q8IWW8 467 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 SLC35F6Q8N357 371 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 LRRC57Q8N9N7 239 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 FEZF2Q8TBJ5 459 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 PIWIL1Q96J94 861 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 CALR3Q96L12 384 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 WDR24Q96S15 920 aa17.81■□□□□ 0.44
TSPAN4-205ENST00000397406 FAM86C2PA6NEL3 165 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 GOLGA8SH3BPF8 625 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 KIF2AO00139 706 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 FANCGO15287 622 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 BUB1BO60566 1050 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 LCP1P13796 627 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 CREMQ03060 361 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 ADCY1Q08828 1119 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 ADIGQ0VDE8 80 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 RAB33AQ14088 237 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 IFI16Q16666 785 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 TPGS2Q68CL5 300 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 ZDHHC17Q8IUH5 632 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 SCUBE3Q8IX30 993 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 TRIM58Q8NG06 486 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 ZNF461Q8TAF7 563 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 CLEC4CQ8WTT0 213 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 C8orf48Q96LL4 319 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 LRFN3Q9BTN0 628 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 TRIM7Q9C029 511 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 S1PR5Q9H228 398 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 LRRC4Q9HBW1 653 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 AFF4Q9UHB7 1163 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms