RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ZCCHC9Q8N567 271 aaKnown RBP10.1□□□□□ -0.79
NEDD9-203ENST00000397378 ENGASEQ8NFI3 743 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 SNIP1Q8TAD8 396 aaKnown RBP10.1□□□□□ -0.79
NEDD9-203ENST00000397378 SPATA18Q8TC71 538 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 SH3RF2Q8TEC5 729 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 WBP1Q96G27 269 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 CYP2S1Q96SQ9 504 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 PNKPQ96T60 521 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 ACBD6Q9BR61 282 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 MIR1-1HGQ9H1L0 117 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 IL17BQ9UHF5 180 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 ARHGAP26Q9UNA1 814 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 BTBD3Q9Y2F9 522 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 MYH10P35580 1976 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 NPHP3-ACAD11A0A0J9YXS1 232 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 KAT7O95251 611 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 CHRM1P11229 460 aaPredicted RBP10.09□□□□□ -0.79
NEDD9-203ENST00000397378 KRT10P13645 584 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 HOXB2P14652 356 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 PFKLP17858 780 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 CYP2F1P24903 491 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 PNPLA4P41247 253 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 KIR2DL1P43626 348 aaPredicted RBP10.09□□□□□ -0.79
NEDD9-203ENST00000397378 SLC6A11P48066 632 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ACOT2P49753 483 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 PDE6CP51160 858 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ZNF131P52739 623 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 MESP2Q0VG99 397 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 KCNH2Q12809 1159 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 RESTQ13127 1097 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 KCNB1Q14721 858 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 SUZ12Q15022 739 aaKnown RBP10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
NEDD9-203ENST00000397378 DDR2Q16832 855 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 HLA-BQ31612 363 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 CFAP221Q4G0U5 840 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ARHGAP40Q5TG30 622 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 SDHAF4Q5VUM1 108 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 IL27RAQ6UWB1 636 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 NT5DC4Q86YG4 428 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 SPACA3Q8IXA5 215 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ARL14EPQ8N8R7 260 aaPredicted RBP10.09□□□□□ -0.79
NEDD9-203ENST00000397378 FSIP1Q8NA03 581 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 FGF11Q92914 225 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ERLEC1Q96DZ1 483 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ZNF419Q96HQ0 510 aaPredicted RBP10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ZNF560Q96MR9 790 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 PKMYT1Q99640 499 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 REEP2Q9BRK0 252 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 PARVGQ9HBI0 331 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 ARHGEF4Q9NR80 690 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.09□□□□□ -0.79
NEDD9-203ENST00000397378 STYXL1Q9Y6J8 313 aa10.09□□□□□ -0.79
NEDD9-203ENST00000397378 A0A0A0MRY4 1105 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 C2orf78A6NCI8 922 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 K7ENM7 598 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 SLC26A4O43511 780 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 HDCP19113 662 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 ADSSP30520 456 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 EIF2DP41214 584 aaKnown RBP10.08□□□□□ -0.8
NEDD9-203ENST00000397378 WASP42768 502 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 CLDN6P56747 220 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 TMPRSS3P57727 454 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 GTF2BQ00403 316 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 PTPRNQ16849 979 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 TMEM119Q4V9L6 283 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 ZC2HC1CQ53FD0 456 aaPredicted RBP10.08□□□□□ -0.8
NEDD9-203ENST00000397378 INTS6LQ5JSJ4 861 aaKnown RBP10.08□□□□□ -0.8
NEDD9-203ENST00000397378 BROXQ5VW32 411 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 SLFN12LQ6IEE8 588 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 TRMT11Q7Z4G4 463 aaKnown RBP10.08□□□□□ -0.8
NEDD9-203ENST00000397378 CCDC83Q8IWF9 413 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 TMEM86AQ8N2M4 240 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 PDCL2Q8N4E4 241 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 MYCT1Q8N699 235 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 ZNF513Q8N8E2 541 aaPredicted RBP10.08□□□□□ -0.8
NEDD9-203ENST00000397378 LRRC15Q8TF66 581 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 TMEM176AQ96HP8 235 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 FUBP3Q96I24 572 aaKnown RBP eCLIP10.08□□□□□ -0.8
NEDD9-203ENST00000397378 CDK5RAP3Q96JB5 506 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 FIZ1Q96SL8 496 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 LGMNQ99538 433 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 CD93Q9NPY3 652 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 AGO2Q9UKV8 859 aaKnown RBP10.08□□□□□ -0.8
NEDD9-203ENST00000397378 LIMCH1Q9UPQ0 1083 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 PCDHGB2Q9Y5G2 931 aa10.08□□□□□ -0.8
NEDD9-203ENST00000397378 CABIN1Q9Y6J0 2220 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 KNL1Q8NG31 2342 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 ANKRD63C9JTQ0 380 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 TRAK2O60296 914 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 HUS1O60921 280 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 FAM13AO94988 1023 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 IL18RAPO95256 599 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 CYP17A1P05093 508 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 NDUFV2P19404 249 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 GRIA2P42262 883 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 GRK6P43250 576 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 MAGEA11P43364 429 aa10.07□□□□□ -0.8
NEDD9-203ENST00000397378 TNFRSF4P43489 277 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms