RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CRTAC1Q9NQ79 661 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 KIF3AQ9Y496 699 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 PCDHB9Q9Y5E1 797 aa15.97■□□□□ 0.15
SEC13-206ENST00000397102 PTPRBP23467 1997 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 IGHV1OR15-9A0A0B4J2B8 117 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 E2F8A0AVK6 867 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 TBC1D3BA6NDS4 549 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 ZNF217O75362 1048 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 ABL1P00519 1130 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 TMEM191BP0C7N4 346 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 MBL2P11226 248 aaPredicted RBP15.96■□□□□ 0.15
SEC13-206ENST00000397102 HOXB2P14652 356 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 LMO2P25791 158 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 CYP27A1Q02318 531 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 MYO1EQ12965 1108 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 LY6G5CQ5SRR4 150 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 SLC41A1Q8IVJ1 513 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 ETFBKMTQ8IXQ9 262 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 PCED1BQ96HM7 432 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 FAM84AQ96KN4 292 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 C8orf48Q96LL4 319 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 MTMR12Q9C0I1 747 aa15.96■□□□□ 0.15
SEC13-206ENST00000397102 HOXC11O43248 304 aaPredicted RBP15.95■□□□□ 0.14
SEC13-206ENST00000397102 GARTP22102 1010 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 KCNA1Q09470 495 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 TAF10Q12962 218 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 L1TD1Q5T7N2 865 aaKnown RBP15.95■□□□□ 0.14
SEC13-206ENST00000397102 BTBD8Q5XKL5 378 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 NUDT18Q6ZVK8 323 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 NAXDQ8IW45 347 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 TRIML1Q8N9V2 468 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 TERB1Q8NA31 727 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 HSPA12BQ96MM6 686 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 SLITRK1Q96PX8 696 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 ACCSQ96QU6 501 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 FAM124BQ9H5Z6 455 aaPredicted RBP15.95■□□□□ 0.14
SEC13-206ENST00000397102 PDE11AQ9HCR9 933 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 SEL1LQ9UBV2 794 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 SUSD2Q9UGT4 822 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 APOBEC2Q9Y235 224 aaKnown RBP15.95■□□□□ 0.14
SEC13-206ENST00000397102 R3HCC1Q9Y3T6 440 aaKnown RBP15.95■□□□□ 0.14
SEC13-206ENST00000397102 LAMA5O15230 3695 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 FREM2Q5SZK8 3169 aa15.95■□□□□ 0.14
SEC13-206ENST00000397102 A0A1W2PQF6 199 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 F8VP50 259 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 ZBTB24O43167 697 aaPredicted RBP15.94■□□□□ 0.14
SEC13-206ENST00000397102 TULP3O75386 442 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 WARSP23381 471 aaKnown RBP15.94■□□□□ 0.14
SEC13-206ENST00000397102 NTSR1P30989 418 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 DDIT3P35638 169 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
SEC13-206ENST00000397102 PLEKHG6Q3KR16 790 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 C10orf76Q5T2E6 689 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 TDRD10Q5VZ19 366 aaKnown RBP15.94■□□□□ 0.14
SEC13-206ENST00000397102 DYMQ7RTS9 669 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 NAT16Q8N8M0 369 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 PNPLA1Q8N8W4 532 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 MYCBPAPQ8TBZ2 947 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 HPDLQ96IR7 371 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 ANKRD36BP1Q96IX9 119 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 MRPL44Q9H9J2 332 aaKnown RBP15.94■□□□□ 0.14
SEC13-206ENST00000397102 DEC1Q9P2X7 70 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 CYP8B1Q9UNU6 501 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 STARD13Q9Y3M8 1113 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 ACACAQ13085 2346 aa15.94■□□□□ 0.14
SEC13-206ENST00000397102 GOLGA8IPA6NC78 632 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 GOLGA8JA6NMD2 632 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 PDGFRBP09619 1106 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 NDUFV2P19404 249 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 SYCP2LQ5T4T6 812 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 GLRX5Q86SX6 157 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 RGL4Q8IZJ4 473 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 MDM1Q8TC05 714 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 ZNF419Q96HQ0 510 aaPredicted RBP15.93■□□□□ 0.14
SEC13-206ENST00000397102 ZFRQ96KR1 1074 aaKnown RBP15.93■□□□□ 0.14
SEC13-206ENST00000397102 DUSP9Q99956 384 aaKnown RBP15.93■□□□□ 0.14
SEC13-206ENST00000397102 CD248Q9HCU0 757 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 SCUBE2Q9NQ36 999 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 INTS13Q9NVM9 706 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 HCN2Q9UL51 889 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 IGSF10Q6WRI0 2623 aa15.93■□□□□ 0.14
SEC13-206ENST00000397102 BMP15O95972 392 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 GNSP15586 552 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 GAP43P17677 238 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 WASP42768 502 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 GRIN1Q05586 938 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 MDH1BQ5I0G3 518 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 TOGARAM2Q6ZUX3 1019 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 MIB1Q86YT6 1006 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 PDZD8Q8NEN9 1154 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 IPO4Q8TEX9 1081 aaKnown RBP15.92■□□□□ 0.14
SEC13-206ENST00000397102 HNRNPLLQ8WVV9 542 aaKnown RBP15.92■□□□□ 0.14
SEC13-206ENST00000397102 OVCA2Q8WZ82 227 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 FOXJ1Q92949 421 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 BBC3Q96PG8 261 aaPredicted RBP15.92■□□□□ 0.14
SEC13-206ENST00000397102 CBWD1Q9BRT8 395 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 ZDHHC5Q9C0B5 715 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 SPHK2Q9NRA0 654 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 SH3BP1Q9Y3L3 701 aa15.92■□□□□ 0.14
SEC13-206ENST00000397102 GCN1Q92616 2671 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms