RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CFAP97Q9P2B7 532 aa19.4■□□□□ 0.7
FXN-203ENST00000396366 MYO16Q9Y6X6 1858 aa19.39■□□□□ 0.7
FXN-203ENST00000396366 MYOFQ9NZM1 2061 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 DNAH14Q0VDD8 3507 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 DRD1P21728 446 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 PMS1P54277 932 aaKnown RBP19.39■□□□□ 0.69
FXN-203ENST00000396366 MCCD1P59942 119 aaPredicted RBP19.39■□□□□ 0.69
FXN-203ENST00000396366 NUCB2P80303 420 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 INCA1Q0VD86 236 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 SIM2Q14190 667 aaPredicted RBP19.39■□□□□ 0.69
FXN-203ENST00000396366 EDRF1Q3B7T1 1238 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 GPRIN1Q7Z2K8 1008 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 JAKMIP2Q96AA8 810 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 TMEM8AQ9HCN3 771 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 CSNK1G1Q9HCP0 422 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 PCDHA5Q9Y5H7 936 aa19.39■□□□□ 0.69
FXN-203ENST00000396366 NFATC1O95644 943 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 CYP17A1P05093 508 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 TGM1P22735 817 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 OPRD1P41143 372 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 NR1H3Q13133 447 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 ZNF658Q5TYW1 1059 aaPredicted RBP19.38■□□□□ 0.69
FXN-203ENST00000396366 ANKRD40Q6AI12 368 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 ISM2Q6H9L7 571 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 PDZD8Q8NEN9 1154 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 OVCA2Q8WZ82 227 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 WBP2Q969T9 261 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 ZFRQ96KR1 1074 aaKnown RBP19.38■□□□□ 0.69
FXN-203ENST00000396366 IMPG2Q9BZV3 1241 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 PARD6AQ9NPB6 346 aa19.38■□□□□ 0.69
FXN-203ENST00000396366 CEP250Q9BV73 2442 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 FAM92AA1XBS5 289 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 HHLA1C9JL84 531 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 CETN3O15182 167 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 ZDHHC11BP0C7U3 371 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 SLC6A11P48066 632 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 ENPEPQ07075 957 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 HECTD3Q5T447 861 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 SNX30Q5VWJ9 437 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 KRT39Q6A163 491 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 RHBDF2Q6PJF5 856 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 CLEC20AQ6ZU45 233 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 RPLP0P6Q8NHW5 317 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 CYFIP2Q96F07 1278 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 CCDC34Q96HJ3 373 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 GSDMAQ96QA5 445 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 HNRNPABQ99729 332 aaKnown RBP19.37■□□□□ 0.69
FXN-203ENST00000396366 NT5C1AQ9BXI3 368 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 NIF3L1Q9GZT8 377 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 CYP3A43Q9HB55 503 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 RMND1Q9NWS8 449 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 SLC8A2Q9UPR5 921 aa19.37■□□□□ 0.69
FXN-203ENST00000396366 TRIM49BA6NDI0 452 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 ATG13O75143 517 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 CILPO75339 1184 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 TBX18O95935 607 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 FAM200BP0CF97 657 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 HOXA6P31267 233 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 GTF2H1P32780 548 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 MESP2Q0VG99 397 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 DHCR24Q15392 516 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 ZNF394Q53GI3 561 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 WDR5BQ86VZ2 330 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 SFTPA1Q8IWL2 248 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 SPATA20Q8TB22 786 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 TATDN2Q93075 761 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 SMARCE1Q969G3 411 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 ARID3AQ99856 593 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 COMMD8Q9NX08 183 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 OSER1Q9NX31 292 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 RAB23Q9ULC3 237 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 KIAA1549LQ6ZVL6 1849 aa19.36■□□□□ 0.69
FXN-203ENST00000396366 K7EQS6 105 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 EPB41P11171 864 aaKnown RBP19.35■□□□□ 0.69
FXN-203ENST00000396366 MXI1P50539 228 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 SEC13P55735 322 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 SPEM2Q0P670 501 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 CBWD6Q4V339 395 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 CBWD3Q5JTY5 395 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 CBWD5Q5RIA9 395 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 LAIR1Q6GTX8 287 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 C12orf40Q86WS4 652 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 FBXL13Q8NEE6 735 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 SECISBP2LQ93073 1101 aaKnown RBP19.35■□□□□ 0.69
FXN-203ENST00000396366 HHIPQ96QV1 700 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 RAB20Q9NX57 234 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 GMEB2Q9UKD1 530 aa19.35■□□□□ 0.69
FXN-203ENST00000396366 EML5Q05BV3 1969 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 CYP26A1O43174 497 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 SMC2O95347 1197 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 IRF1P10914 325 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 CNR2P34972 360 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 RSPO4Q2I0M5 234 aaPredicted RBP19.34■□□□□ 0.69
FXN-203ENST00000396366 FBXO43Q4G163 708 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 COBLL1Q53SF7 1204 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 C2orf27AQ580R0 203 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 DCAF17Q5H9S7 520 aaPredicted RBP19.34■□□□□ 0.69
FXN-203ENST00000396366 PPP1R26Q5T8A7 1209 aaPredicted RBP19.34■□□□□ 0.69
FXN-203ENST00000396366 CCDC150Q8NCX0 1101 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 EXOC4Q96A65 974 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms